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Information for unigene UN24388
| FASTA Sequence |
| Unigene ID: UN24388 | Length: 973 |
| SNP | GGATTCAAATTGAGAAGTAACGATAAATGGATAAAAACGCAAGAAGCTCACCGTCTTTCCCTTTGGCCGGTCGTGTAGCCATAGTG
ACTGGAGCCACAAGAGGCATCGGCCGTGCGATTGCCATTCACCTCCACAGCTTTGGCGCAAGAGTCACCCTCAATTATGTCTCGAG
CTCATCAGAAGCTGAACTTCTGGCTTCGGAACTAAACGCGTCATCTCAACAAAACTCAGCAATAGCAGTGAGAGCAGATGTTTCAG
ATCCTGACCAGATCAACAACTTGTTTGATCAAACCGAACAAGAGTTCGGATCAAAAGTTCACATTCTCATAAATTGTGCAGGTGTC
TTGGACCCAAAGTATCCATCTATATCCGAGACTACACTTGACGATTTCGAGAAAACGTTCAGAACTAACACGAGAGGGGCTTTCGT
GTGTTGCAAGGAAGCTGCTAAGAGGGTTGTTAGAGGAGGTGGTGGAAGAATCATTATGATGTCTACTTCGCAGGTCGGAGCACTCT
CGCCAGGTTATGGAGTCTATACCGCGTCAAAGGCTGCGGTGGAAACAATGGTAAGAGTGTTGGCAAAAGAACTGAAGGGAAGCCAG
ATTACCGCAAACTGTGTTGCTCCAGGGCCGGTTGCGACTGAGATGTTCTATGCAGGAAAAAGTGATGAAACGGTGAAGATGCTTGC
AAGCGCGTCTCCAATGGGGAGGATTGGCGAGCCAAAGGATGTTGCGGAGATTGTAGGATTTTTGGCAGGTGATGGTGGGGAATGGA
TCAACGGTCAGGTTATTAGGGCCAATGGAGGCTTTGTTGTGTGAAAATAGGAAGATTAAACTATAAAATATTTGATGTTAACGTCT
TTTGGTGTGTTGATGTTGTGATTCTCACTTTAATTTGTTTCTCTCTTTTGTACCTCTGTTTTTCTCTGTTTTATTGTGCAAGATTT
GATCTTTTACCAAATAACTTTTTTTTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002863166 short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] | 1167 | 1e-125 |
| NP_193054 Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] | 1166 | 1e-125 |
| XP_002525441 short-chain type dehydrogenase, putative [Ricinus communis] | 967 | 2e-102 |
| XP_002319165 predicted protein [Populus trichocarpa] | 947 | 4e-100 |
| XP_002282164 PREDICTED: hypothetical protein [Vitis vinifera] | 925 | 1e-097 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q08632 Short-chain type dehydrogenase/reductase | 703 | 3e-073 |
| Q00791 Versicolorin reductase | 457 | 1e-044 |
| Q12634 Tetrahydroxynaphthalene reductase | 381 | 7e-036 |
| Q5HGK2 3-oxoacyl-[acyl-carrier-protein] reductase | 367 | 3e-034 |
| P0A0H9 3-oxoacyl-[acyl-carrier-protein] reductase | 367 | 3e-034 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SVQ9 AT4g13180/F17N18_70 | 1166 | 1e-125 |
| B9SHH2 Short-chain type dehydrogenase, putative | 967 | 1e-102 |
| B9I5Y8 Predicted protein | 947 | 2e-100 |
| B9I5Y9 Predicted protein | 876 | 4e-092 |
| B9SHH3 Short-chain type dehydrogenase, putative | 855 | 1e-089 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G13180.1 short-chain dehydrogenase/reductase (SDR) family protein | 1167 | 4e-128 |
| AT3G03980.1 short-chain dehydrogenase/reductase (SDR) family protein | 848 | 4e-091 |
| AT5G18210.1 short-chain dehydrogenase/reductase (SDR) family protein | 764 | 2e-081 |
| AT3G04000.1 short-chain dehydrogenase/reductase (SDR) family protein | 617 | 3e-064 |
| AT5G06060.1 tropinone reductase, putative / tropine dehydrogenase, putative | 310 | 1e-028 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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