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Information for unigene UN24391
| FASTA Sequence |
| Unigene ID: UN24391 | Length: 1204 |
SSR | | GGAGGGTTGAGTCGAGGGGTAACTCACCGGCGATTTTGCGAGATGGGAAGAGACCGCGACGACTCTCCGCCGGAGAAGGCGAGATG
CGACGACGAGGATAAAGACAACAGAAGAGAATCATCCCGGGAGAAATCGAGCCGTATCGAAAAGAAGCCGGTCGAAGAAGAAGTGA
GTCGGCGCGAATCGAAGAGAAAATCAAAAGACGGCAGAGACTCCGATTCTGGTTCGGGACTGGAGAGTGGTAGCGAGTCCGAGTCG
GAGAAGGAAGAGAGAGAGAGAGAGAAAGAGAAGAAGAAGAAGAAGAGAAGGAAGGAGAAAGGAGATGATAGCAGCAAGAAGAAGAA
GCGGAAGAAGGAGAAGAAGTCTGAGAAAGCCAAGAAAGGAGCTGTTACTGAATCTTGGGGGAAGTATGGAGTCATCAGAGAGACTG
ATATGTGGAATAAACGACCAGAGTTCACAGCATGGCTGCTTGAAGTAAAAGAGGTCAACTTGGAAAGCTTGCCACCATGGGAAGAG
AAGAAAATGTTTAAAGATTTCATGGAAGATCACAATACTGGTACATTTACCTCCAAGAAGTACTATGACATTGATGGTTACTATAG
ACGTAAGTTGGAGAAAGAGATGAAGAAGGGTTTGAAGAAAGCTGGGCAGAGTGAACGGACTGTGTTCAATGACGAGGAGCAACGCC
GGCTAGAGATGCAGGAAGCACGCGAGAAGCAGAAGGAAGAAGAAGTTTTAGCTTTAAAGCGATCAATGGAAGGCGGAATGGCTCAA
GCTATGAAGGAACAAGCTCGGCTTAAGGAAGAAATGGTTTACTTGTACAAGATTGGGGACATGGAGGGTGCAGCTGCTATTCAGAA
AAGGTTGGATCCAGATGTTCCCATGTAATGTGGAGGTTTTGGTTTAAGCTACAACATTTTTTAGTTTTCGTTTTTAAGCTGTGTTC
CAAGTATCGAGCTTGTGTAACACGGCATAAGAAGAAAAAAAAGCCAAAACGTTCATCTCTAGAGCTTTAAAGCATGATCTTGCCTT
TTTTGGATATTATACACCATCGGCTAGTCAAGTATTGAAAACCGTTATGCTTTTTAATCGGCTAGTCAAGTATTGAAAACCGTTAT
GTTTTTTAATCGGCTAGTCAAGTATTGAAAACCGTTATGCTTTTTAGACTGTGTGTGACAGAGAAGAAAAATTGGACCCTTCCTAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAM63475 unknown [Arabidopsis thaliana] | 1003 | 2e-106 |
| NP_568799 uncharacterized protein [Arabidopsis thaliana] | 1002 | 2e-106 |
| XP_002864283 hypothetical protein ARALYDRAFT_331729 [Arabidopsis lyrata subsp. lyrata] | 998 | 6e-106 |
| XP_002527602 nucleic acid binding protein, putative [Ricinus communis] | 837 | 3e-087 |
| XP_002316904 predicted protein [Populus trichocarpa] | 830 | 2e-086 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q6C1L3 Protein PXR1 | 176 | 5e-012 |
| A5E4P1 Protein PXR1 | 170 | 3e-011 |
| Q55FI4 Nucleolar protein 58 | 160 | 4e-010 |
| Q4V7C9 NF-kappa-B-activating protein | 155 | 1e-009 |
| Q54T81 Probable H/ACA ribonucleoprotein complex subunit 4 | 147 | 1e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LCP8 Putative uncharacterized protein | 1003 | 1e-106 |
| B9SNN8 Nucleic acid binding protein, putative | 837 | 2e-087 |
| B9HZW1 Predicted protein | 830 | 1e-086 |
| B8ASD2 Putative uncharacterized protein | 803 | 2e-083 |
| Q7X8Y1 OSJNBa0074L08.19 protein | 803 | 2e-083 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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