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Information for unigene UN24394

FASTA Sequence
Unigene ID: UN24394Length: 1039  SNP
GGCGAGAGCAGCTGCGCAAGCTAAAGCTAAGCAGCAAGAAGACAATAACAATGATCTTGACTCCTTCTTTAACTCGGTTTCCAGAC
CAAGTAGTGCTCCACGACAGAGAACCAACCCTCCGGTGGATCCTTTCCAAGATTCATGGAACAGGGGAGGGCCTTACGAATCTAAC
AGGGCCTCTTCGCGAGCGCCTTCTGGAGCATCAGAGAACCTGAGGAAGACCTCTTCGGCTACAAACATTGTGGATGATCTCAGTTC
AATATTTGGAGCTTCAGCAGCAACCCAGTCCGGTGGGTTTCAAGATATTGAAGGAGAAACTGAAGAGAGACGGCGTGCCAGGCTGG
AACGCCACCAGAGAACACAGGAGCGAGCTGCGAAAGCTCTTGCTGAGAAAAATGATCGTGATCTTCAAGTACAAAGAGAACAAGCT
GAGAAAAATAGGATTGGTGAGACCTTGGATGTTGAGATAAAACGTTGGGGTGCGGGGAAGGAAGCAAACTTACGTGCCTTGCTTTC
CACGCTACAATATGTTCTTTGGCCAGAATGCGGTTGGCAGCCTGTTTCATTGACCGATTTAATTACAGCTGCTTCTGTCAAGAAAT
TTTACAGGAAGGCCACTCTCTGTATACACCCTGACAAAGTTCAGCAAAAAGGCGCTAATCTCCAGCAGAAATACATTGCGGAGAAA
GTGTTCGACATGCTCAAGGAAGCATGGAACAAGTTCAACTCGGAAGAACTCTTTTAAACTGGATTATGTTTTGAGTTAGTGTCATT
TTGTGTGTCGCCAAAAAGATGAAGCAAGTTCATTCATTAAAATGCCAAAAACGTGGTGCCAAAGTTGGATTACCCAAATATTGCAT
CATTGTAGCCATTGCAGCAATTGGGCAGTCTTATTTTTTGTTGTTGATTTTTTCCCTCTCACTTTGTCTTTCACTATCCAGGTCTT
TGTAAGACTACGATGGAAAATTTGTTGATGTTGATTTCTTGTATCAGAGTACAATATTTATACATATATAAATGTTTATTGAGGTT
TGACACA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_193013 auxilin-related protein 2 [Arabidopsis thaliana]11356e-122
NP_001190708 auxilin-related protein 2 [Arabidopsis thaliana]11331e-121
XP_002863292 hypothetical protein ARALYDRAFT_497125 [Arabidopsis lyrata subsp. lyrata]11195e-120
AAL91223 auxilin-like protein [Arabidopsis thaliana]11142e-119
NP_193014 auxilin-related protein 1 [Arabidopsis thaliana]11142e-119

Swiss-Prot top hits (Blast detail)Scoree value
Q0WQ57 Auxilin-related protein 211353e-123
Q9SU08 Auxilin-related protein 111148e-121
O13773 UBA domain-containing protein 72312e-018
Q27974 Putative tyrosine-protein phosphatase auxilin1991e-014
O75061 Putative tyrosine-protein phosphatase auxilin1991e-014

TrEMBL top hits (Blast detail)Scoree value
B9SF05 Auxilin, putative9097e-096
B8BLP8 Putative uncharacterized protein8399e-088
Q2R031 Expressed protein8399e-088
B6SWL8 Putative uncharacterized protein8237e-086
C0PDH9 Putative uncharacterized protein8237e-086

Arabidopsis top hits (Blast detail)Scoree value
AT4G12770.1 heat shock protein binding11362e-124
AT4G12780.1 heat shock protein binding11155e-122
AT1G21660.1 heat shock protein binding5904e-061
AT4G36520.1 heat shock protein binding5653e-058
AT1G75310.1 AUL1; heat shock protein binding5107e-052

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  14%
 
83  43%
 
103  43%

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