RadishBase

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Information for unigene UN24396

FASTA Sequence

Unigene ID: UN24396	Length: 768	SSR
AGATATCCTCTTTCTCGCGAAACCCTAATCTTTGATTTCCGCTGCGTTCTTCCGAATCTCCGTCGGATCTCAAATTTGTTTTTCTC AGTGCTGAAATCTCCGGGGAATGCAGAGAAGGTTTTGCTGCGAGGTGGACAACGGCTGGAAGGAGTCCCTCTCTCAAGGGATTGTC ATCGTCGGCCCTAAAGCAAGAACCAGGGACAAACCTTGGGATCATCTTCTCTAATCTTTTCTACATGGCTCGGATCTTGGTTCAAC GAGGAAGTTCTTCCAATGCTACCCGCTCTACTTCCTCCTCCTCCTCCTCCTCTGCCTCCTCTTCTGGTTCCTCTTCTGCCTCTGGA ACAGAACCACCAGTGACTGTTTGTGAAGAAACTACGGATGAGGTTACTGTAGTTGAAGAAGAAGCAGGGTGTTCTGATGCTAAGGA TGTATCACTCCACAGTGATGAACCTTTGGCTAAAGAAGATGATGAAGGTTTGGTTGTTTCGGAAAACGTTGTTGTTGTTGAAGGTG AAGGTGTAGATTGTGATTCTCCAGTTAGTGGTGGCGATGACCCTGATTCACCATCACCACCCGTGCCTGTTCCTCCACCGAAGCCT TCTTCTAATGTTACAACTGGTGGTAATAGGAGATCGATCTTGGGAAGTTTTGGTGATTTACAAATTGGAGCAACAACAAGAAGAGG AGCTGGGCCTCGCTCTCTTGTATCCACTAGGGGTTCGCCAACTGGATCACGTCCTTCTTCTCCAAGATCACAGAGTGAGA

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
NP_565648 OTU-like cysteine type protease [Arabidopsis thaliana]	515	3e-050
NP_973544 OTU-like cysteine type protease [Arabidopsis thaliana]	515	3e-050
XP_002880909 hypothetical protein ARALYDRAFT_481634 [Arabidopsis lyrata subsp. lyrata]	487	5e-047
XP_002862839 hypothetical protein ARALYDRAFT_359343 [Arabidopsis lyrata subsp. lyrata]	376	4e-034

Swiss-Prot top hits	Score	e value
No hits found

TrEMBL top hits (Blast detail)	Score	e value
Q3EBS9 Putative uncharacterized protein At2g27350.3	515	2e-050
Q9XIP2 At2g27350	515	2e-050
B4I8S7 GM15514	136	2e-006

Arabidopsis top hits (Blast detail)	Score	e value
AT2G27350.1 OTU-like cysteine protease family protein	515	1e-052
AT2G27350.2 OTU-like cysteine protease family protein	515	1e-052
AT2G27350.5 OTU-like cysteine protease family protein	515	1e-052
AT2G27350.3 OTU-like cysteine protease family protein	515	1e-052
AT2G27350.4 OTU-like cysteine protease family protein	515	1e-052

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


6	1			50%


8	1			50%

Unigene Members	Member information