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Information for unigene UN24399

FASTA Sequence
Unigene ID: UN24399Length: 1211 SSR 
AGAATGTCATACATCAAAAGATTAGAGTTTAAACAGAGAAACGAGTGAAGAAAGAAATGAGATCAGCACGAATCTAAATCTAAATC
TAGTCTAATCAAAACATAAACAAACAAGATCAATATCACACGTGTTCAATTCTTCTCTCATGGACCATCAAATTTATCAAATCTTT
AAAAGGAAAAAAAAAAGATTCTGTGCTCGAAATGAATTAAAGTAAATAAATTAAACACCCCAATTCATCAGAAGATTTATACCAAA
ACCTTGTGCCACCATTCATGGTTTGGTCAAAAGCTAATAAGAATCCCTTCCTTTATATGGCATCTCCGGTTGGTATGGCGACGGCG
GCATAAACAAAACCGGTCTCTGCTGACTAACCATCATCTGTTGTGGGTACTGTGGACTATTAGGAGAATAGTAAGTTTGATTTGGA
CCAAGCTGCTGAGGTGTATTGTTGTTATACATCATTGGATGTTGTTGTCCAGGGAATGCTGCTCCCATTCCGTATAAAATGTGTAT
TCCAGGCATAGGCGGAGGGGGAGGGTAATAGAATGATCCGTCCGCAACTGGAGATTGAGGCCGTGTAGTTGTTGGAGATGGTTGGA
AACTTTTTGCGTTGGGGTTGGGCTTAAATTCCTTGGCATTTGGGTTGAGGTTGGACTTTTCTGAAGAATAAGAACCAATTGAAGAG
CTTGGTGATAGCATTGGACGACTTGATGCTGCCGAGGAAGTTGCAGAGTTTTCTGAATTTCCAGGCCGCCAATGAGAACTCTCAGG
TTTCACTCTGTCAGAAAATCGACTGTGTAGGTTTCCATCAGTGGAACTTTGCCTATCAGCAGTTCTCCATGGATCAGAGGTTGCTG
CATCTTCATTAATATCTTCAAGACCAGACACTGATTCCACGGACGGCTTTTTGTAATGGGAAGCCTCTAGACTTTTGCCGGTTCTC
TGCTCACAAAACTGGCTCTTGCTACCTGGAGCAGGAGTATCTTTGGATGGCTGTTCGAACATAGGCTGCCTATTTGAGTTCAAGCA
GCTCTGACCTACACTAGCTAGACTGCCACCCCCCCATGATTCTATAGCCCTTACCATTGCCACTTGAAGTAGATTTCATGCCATCA
GAAGCAGTTGAATCACCAAAAGTCAAATTATTACGGCAATTCAACAAGATTTCTTCTTCTTCTTCCTCTTCATAACCCGAATCACC
AAATCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002894481 ctc-interacting domain 3 [Arabidopsis lyrata subsp. lyrata]7971e-082
NP_175819 ctc-interacting domain 3 protein [Arabidopsis thaliana]7754e-080
AAD25791 F15I1.27 [Arabidopsis thaliana]4215e-039
NP_566471 CTC-interacting domain 4 protein [Arabidopsis thaliana]4171e-038
XP_002298103 predicted protein [Populus trichocarpa]4072e-037

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8L793 Putative uncharacterized protein At1g541707753e-080
Q9SYH5 F15I1.275836e-058
Q94AM9 Putative uncharacterized protein At3g140104171e-038
B9GKW4 Predicted protein4071e-037
B9S5T2 Putative uncharacterized protein3757e-034

Arabidopsis top hits (Blast detail)Scoree value
AT1G54170.1 CID3 (CTC-Interacting Domain 3)7761e-082
AT3G14010.1 CID4 (CTC-Interacting Domain 4); protein binding4175e-041
AT3G14010.2 CID4 (CTC-Interacting Domain 4); protein binding4175e-041
AT3G14010.3 CID4 (CTC-Interacting Domain 4); protein binding4175e-041

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  17%
 
95  83%

Unigene MembersMember information