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Information for unigene UN24405
| FASTA Sequence |
| Unigene ID: UN24405 | Length: 1215 |
SSR | | GCAAACCAGCCCATTCGAGAAACAGTGAACTATCATTCAAGTAATCAAACTGGAGAAACTGCTGTAGACTCTTCTAAGGATCGAAC
CGCATCCAATGCTGTTGGATGGAACGATGGCTGGTATATGACTCCTGAAACGCATCACTCTGCTGCTGCTGCTGCTGTGGAATTGG
AAGCAAGTGCTCCTCGAACCAACACTGTTGGAAAAGATCACGGTAAGCAGCAGGGTTACAGAAGTAGCTATGGTGACTCTAAAAAG
GCGAATACAAGAGATTCCAGTAAAGCTCATATGCAGCAGTCTGGCCATGGGTCAGGTCAACAAGATCTGCATGTTGGTTCGAATGA
AATTCGTGGTCAGTCTGGTGGTGGTCGTCAATATTCGAGGGACAGAACTTATGCATCTCAGAAAAGGGATGGTGGATACGAGCAGC
AGGGGTTTACTCCAGAACAGAAAATGAACTCAGCTGATACACCAAACCATTCTCAAAACCGATCTGCCAGTCAGGAGGTCCAGGGT
GGGCATAATCCGAATAGTATGTTCCAAACGAACACAGGCCAGAATCGACGGTTTGGAAGAGGACAGGAGCCACACGGAGGTTGGGG
TTCGTCGATGCAAGAGAACATGCACCATCACCATCAGAGGCCACTTTCAAACAGAGGTAGACAGAAGCCAAATCTGCATTACGAGT
ACAAGCCTGTTGGGTCACGTGCTTACGAAGGAGAACATAGTCGAGAACGATTGAAAGAGAGTTCAGAAGGTCCAAGATACAGGGAG
AAGGGGCAGGGAAACCAGAGGCGTGATGGACAAAAGTCGTACCAACAGCAAAGGGGTTAGTGCTGGGAGAAACACTGGTCATGGAT
CATTAGATGAGAGAAACTAAGATTGTCTTGTTTGTGATTAGGTAGTTGAGCTGTGTTGGCGAGGCTTTGCCAAAGGAGTAGCATCT
GATGAGGACGTATTTGGCAACAAAGCCTTTGCTCTGGAAGGGTTTTTATGTATTTCAGTGGATTATTTGATTATGGATCCTAACTT
TAGCATTTTGTATTACATTTGGTGGCAGGTTGGACTTTACCTGTTCCGTTAAGCCTTTGCTCTGTTGCTTGTTTTTTTCTTTGTTT
TCAGAGTGTGGGAATCATCTTATCTAACATGAACTTTTTCTTTTTCTTTTTACTTAGAAGCTGAAACAGAACTATGTATCATAAAA
TCTGCCATCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002869706 hypothetical protein ARALYDRAFT_329195 [Arabidopsis lyrata subsp. lyrata] | 664 | 3e-067 |
| CAA22995 putative protein [Arabidopsis thaliana] | 647 | 3e-065 |
| AAL32626 putative protein [Arabidopsis thaliana] | 647 | 3e-065 |
| NP_194199 modifier of snc1 protein [Arabidopsis thaliana] | 647 | 3e-065 |
| Q9SB63 RecName: Full=Protein MODIFIER OF SNC1 1; AltName: Full=MODIFIER OF snc1, 1 | 647 | 3e-065 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8W4I1 Putative uncharacterized protein At4g24680 | 647 | 2e-065 |
| Q9SB63 Putative uncharacterized protein AT4g24680 | 647 | 2e-065 |
| B9IEU8 Predicted protein | 170 | 4e-010 |
| B9RAY8 Putative uncharacterized protein | 163 | 3e-009 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G24680.1 FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: BAT2, N-terminal (InterPro:IPR009738); Has 6700 Blast hits to 3976 proteins in 401 species: Archae - 2; Bacteria - 590; Metazoa - 2482; Fungi - 634; Plants - 203; Viruses - 19; Other Eukaryotes - 2770 (source: NCBI BLink). | 647 | 1e-067 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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