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Information for unigene UN24471
| FASTA Sequence |
| Unigene ID: UN24471 | Length: 1143 |
SSR | | GGACTCTCGGCGGAGAGAGAGAGACCGCTATTTGTAGAGAGAGAAAAAGCTTTAAACTAAACTTTATTCACAAAAGATAGAAGGAG
CTCAAAGAAGAAGAAGAAGCTTCCTCGTTTCGAGGAAAGGAAGCAAGATTGTGCATTTATTCATCAATGGGGGAGCTCATCTTCTC
CATTTCTCTCCTGCTTCTGCTTCTGGACTGTTGCCACGGTGGTAAGGTCGGAGTATGTTACGGAAGAAGCGCCGACGATCTCCCGA
CACCATCAAAAGTAGTCCAGCTGATAAAACAGCACAACATCAAATACGTCAGAATCTACGACTACAACTCCCAAGTCCTCAAAGCA
TTCGCCAACACAACCATCGAGCTCATGATCGGAGTCCCAAACTCCGACCTCAAACCTTTCACCCAATCCCAATCAAACGTCGACAC
GTGGCTAAAGAACAGCGTCTTACCATTCTATCCAACCACCAAGATCACTTACATAACAGTCGGAGCCGAATCCACCGACGATCCAC
ACACCACCAACGCCTCGTCTCTCGTCGTCCCCGCGATGCAGAACGTGTTAACCGCTCTCAAGAAAGTCGGCTTGAGCAGAAGGATC
AAAGTCTCCACGACTCTCTCCCTCGGCGTCCTCTCTAGATCTTTCCCTCCTTCAGCCGGAGCCTTCAACAGCAGCTACGCGTATTT
CTTGAGACCCATGCTCGAGTTCTTGGCGGAGAATCAGTCTCCCTTCATGGTCGATCTCTATCCTTACTACGCTTACAGAGATTCCC
CCAGCAACGTGTCTTTGGACTACGTTCTGTTCGAGTCCTCCTCCGAAGTGATTGATCCCAACACCGGTTTGCTCTACAAGAACATG
TTCGACGCTCAAGTAGACGCGCTCTATTACGCGCTCACAGCTCTAAACTTCAGGACGATCAAGATCATGGTCACCGAGACCGGATG
GCCGACCAAAGGTCACCAAAAGGAGAAAGGTGCTGCGTCTCCCGACAACGCAGAGACGTATAACGCTAACATTATACGCCACGCGG
TTACAAACCAAGGCACACCTTCGAAGCCAGGAGAGGCCATGGACGTTTATATATTCTCACTGTTCAACGAGAACAGAAAACTGGTT
TGGACTCGGAGAGGAACTGGGGGCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002864470 glycosyl hydrolase family 17 protein [Arabidopsis lyrata subsp. lyrata] | 1517 | 4e-166 |
| NP_200470 glucan endo-1,3-beta-glucosidase 13 [Arabidopsis thaliana] | 1516 | 5e-166 |
| XP_002514201 Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] | 1278 | 2e-138 |
| XP_002283473 PREDICTED: similar to beta-1,3-glucanase [Vitis vinifera] | 1274 | 6e-138 |
| XP_002330523 predicted protein [Populus trichocarpa] | 1265 | 6e-137 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FJU9 Glucan endo-1,3-beta-glucosidase 13 | 1516 | 2e-167 |
| Q8VYE5 Glucan endo-1,3-beta-glucosidase 12 | 1062 | 9e-115 |
| Q8L868 Glucan endo-1,3-beta-glucosidase 11 | 676 | 5e-070 |
| Q9ZQG9 Glucan endo-1,3-beta-glucosidase 14 | 655 | 1e-067 |
| Q9M069 Glucan endo-1,3-beta-glucosidase 7 | 652 | 3e-067 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RKF7 Glucan endo-1,3-beta-glucosidase, putative | 1278 | 1e-138 |
| B9N5H5 Predicted protein | 1265 | 4e-137 |
| Q1WAK1 Beta-1,3-glucanase | 1248 | 4e-135 |
| Q1WAK0 Beta-1,3-glucanase | 1247 | 5e-135 |
| A2ZXN4 Putative uncharacterized protein | 1210 | 1e-130 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G56590.1 glycosyl hydrolase family 17 protein | 1516 | 2e-168 |
| AT4G29360.2 glycosyl hydrolase family 17 protein | 1062 | 8e-116 |
| AT4G29360.1 glycosyl hydrolase family 17 protein | 1062 | 8e-116 |
| AT4G26830.1 catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | 679 | 2e-071 |
| AT1G32860.1 glycosyl hydrolase family 17 protein | 676 | 5e-071 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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