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Information for unigene UN24473
| FASTA Sequence |
| Unigene ID: UN24473 | Length: 1303 |
SSR | | AAATACAAACATGGAAAACTAATGACTTAACTAGCTTCTCTCTCGCATCAGGAAGACTGTATTACTTTCACTTTAATAGATTACAA
CGTTAGAAAATTACTATATGAAAATTGGATTTACTTTCACCTAAGAAAGAGAAAAAACAAATAAAAGGATTTTATCTAATTTCTAC
TTGAACCTCAAGTCTTCCTATACCTGCACAAGAGAAGAAGCTTGAAAGCTACAAATCACCAGAAACCCGCGAAGTAGAAGATGGTG
GTAGCAGGTGCTGTGTCAAGCTGGTTGGCGGGTAAGCAGATGCTATAAGCTTCTCTTTCGTCAACAGATCAGACCCGTTATTATTA
GACTTTACCACAAAAGTGTGAAACAATGTGTCTTCAGCTAATGAAAGATTAGACTCAGTAACCTCTGAGTTTCTCATTGCCTGTAT
GATTCTCGAAGCTGGATGCGACTCCAACGGTGAGATCACTCTTACCACAACCTCTTCTTCCGCAGCTTGAATGTCAACAACCTCTT
GACTCTCTTCTGCCCCAGTGGTCTCTGTTCCAACTGCTTCGGCTTCAATGATCTTTACTTTCTCTTGAAGCTCTTTGATGTAAGAG
ATGGCGTCTCCAAGAAGAGAAGCTTTGTCCATTTTAGAGATGTTAGGCACAACAGCTCTTAAAGCGTAGAATCTCTGGTTAAGCTT
CTCACGTCTCTGCCTCTCAGCTTCCACGTGGTTCAACGCCTCTTCTCTTCGTTTGCAGGCTTCCTCCCTCGTTTCCTCGGTCGCTT
CTCCTCCACAACAGACACCGTTCCTCCTCCTCCTCCTACTCCTGCTAATAAACTCGCTGGTCTTGTCTGTGTGCAAGAAGTCTTCT
TCACCTTGTGATTCTTATCCTCTACAGCAACCACGTTCACATTCTCTTGCACTTGATTCGAGCTACTCAGTTCTTGTCCGAAAAGC
TTGTGAACCACCACCAAAGGAGGCGGCTTAACTCTCCTCATGAACAAACCTTGAACAGACTTAACCAACTCTACATTCTCAGGCAA
AGACCAAACAGAGCCAAGCTCGAGAACACCAGCATCAGTAGGAACCATAACAACCGTCCTGATCCCAGCTCTCTTAACCATAAAAG
ACCTGAAACAATAATCAGAACCGGAGTTAACCGCATCTGATAACCACACGTGTCTCCCCGAAGCAAAGCACCTCCCAGGACCACCT
TCTCCGTGATTAAAGAAGAAATACATGGAAGCCAAGAAGAACATCTCAGTAGCCGTAACGTTCTCTAAGCTCAAAGCGTAGTTGTC
TTCATCAGATCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_566078 transcription factor ABA-INDUCIBLE bHLH-TYPE [Arabidopsis thaliana] | 609 | 9e-061 |
| AAM19778 At2g46510/F13A10.4 [Arabidopsis thaliana] | 605 | 3e-060 |
| XP_002882073 basic helix-loop-helix family protein [Arabidopsis lyrata subsp. lyrata] | 587 | 3e-058 |
| XP_002523332 DNA binding protein, putative [Ricinus communis] | 395 | 6e-036 |
| XP_002320871 predicted protein [Populus trichocarpa] | 389 | 3e-035 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9ZPY8 Transcription factor ABA-INDUCIBLE bHLH-TYPE | 609 | 4e-062 |
| Q9LNJ5 Transcription factor bHLH13 | 413 | 2e-039 |
| O23487 Transcription factor bHLH3 | 377 | 3e-035 |
| Q39204 Transcription factor MYC2 | 252 | 9e-021 |
| Q9FIP9 Transcription factor ATR2 | 248 | 3e-020 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DI37 AT1G01260 protein (Fragment) | 413 | 3e-038 |
| B9SBG3 DNA binding protein, putative | 395 | 4e-036 |
| B9I8Z0 Predicted protein (Fragment) | 389 | 2e-035 |
| B9GR23 Predicted protein | 384 | 7e-035 |
| B9S4V3 DNA binding protein, putative | 381 | 2e-034 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G46510.1 ATAIB (ABA-INDUCIBLE BHLH-TYPE TRANSCRIPTION FACTOR); DNA binding / transcription factor | 610 | 3e-063 |
| AT1G01260.1 basic helix-loop-helix (bHLH) family protein | 413 | 2e-040 |
| AT1G01260.2 basic helix-loop-helix (bHLH) family protein | 413 | 2e-040 |
| AT4G16430.1 basic helix-loop-helix (bHLH) family protein | 377 | 3e-036 |
| AT1G32640.1 MYC2; DNA binding / transcription activator/ transcription factor | 252 | 8e-022 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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