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Information for unigene UN24496

FASTA Sequence
Unigene ID: UN24496Length: 840  SNP
TGATAAACGAAGAAAGACTCAGGCTATGTTGACATGGAACATGACGTGCACGTATTCACAGTTTCTAGCTCAGAAAACTCCCACTT
GTTGTGTTTCACTCTCGGCTTTCTACAATAAGACTATCGTACCATGCCCAACATGTTCGTGTGGATGTCAAAACGGTACATGTGTC
GACAACCCGAAAATAGCTTCGGTGGTATCAGCTGTCTCAGGGAAGAACAACCTCCAGCCGCTCTTGCAATGTACGCAGCATATGTG
TCCCATCAGAGTTCATTGGCATGTGAAAACTAACTACAAAGAGTACTGGCGTGTGAAGGTCACAATCACAAACTTCAACTACAATA
TGAATTACTCGCAGTGGAATTTGGTTGTTCAGCATCCCAACTTCGACAATATCACTCAGCTTTTCAGCTTTAACTACAAACCTCTT
AGTCCTTACGCTGGCATAAATGACACGGCCATGTTGTGGGGGATCAAGTTCTATAACGATTTTTTGAGCCAGGCCGGTCCAGTAGG
CAACGTACAGTCAGAACTTCTCTTCCGAAAGGACCCGTCATCGTTCACGCTCGAGAAAGGATGGGCGTTTCCAAGACGCATTTACT
TCAACGGAGATAACTGCGTTATGCCACCTCCAGACTCGTATCCATGGCTTCCTAACGCTGCTTCAAACCTTGCAACTTCGTCACTC
ATCATACTTATCATTAATTTCTTCTCTGTTTTGATTCTTATGTAAAGTGATCACGTTGAAATATTGTGCTTTTGACCCGGTTCATA
CTTTTGGGATCAGACTGGATCCTCATTGGCTAATATATAAAAATGGCATGCGGCACTCTGTTCATG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002875546 hypothetical protein ARALYDRAFT_484733 [Arabidopsis lyrata subsp. lyrata]11751e-126
NP_566851 COBRA-like protein 2 [Arabidopsis thaliana]11679e-126
AAM67179 phytochelatin synthetase-like protein [Arabidopsis thaliana]11661e-125
BAB02996 phytochelatin synthetase-like protein [Arabidopsis thaliana]11525e-124
XP_002281199 PREDICTED: hypothetical protein isoform 1 [Vitis vinifera]10531e-112

Swiss-Prot top hits (Blast detail)Scoree value
Q8L8Q7 COBRA-like protein 211782e-128
Q9SRT7 COBRA-like protein 110375e-112
Q94KT8 Protein COBRA10213e-110
Q6Z4G8 COBRA-like protein 19936e-107
Q60E70 COBRA-like protein 39694e-104

TrEMBL top hits (Blast detail)Scoree value
A5BRW4 Putative uncharacterized protein10502e-112
Q69F98 Phytochelatin synthetase-like protein10305e-110
B9H0H5 Predicted protein10215e-109
B9SYD1 Protein COBRA, putative10199e-109
A9P983 Predicted protein10101e-107

Arabidopsis top hits (Blast detail)Scoree value
AT3G29810.1 COBL2 (COBRA-LIKE PROTEIN 2 PRECURSOR)11791e-129
AT3G02210.1 COBL1 (COBRA-LIKE PROTEIN 1 PRECURSOR)10374e-113
AT5G60920.1 COB (COBRA)10213e-111
AT5G15630.1 IRX69022e-097
AT1G09790.1 COBL6 (COBRA-LIKE PROTEIN 6 PRECURSOR)7722e-082

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  14%
 
202  29%
 
101  14%
 
83  43%

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