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Information for unigene UN24499
| FASTA Sequence |
| Unigene ID: UN24499 | Length: 2086 |
SSR | | GGATAAATAGTAGATTTATGCATGGTTAAACAGTTAAAACATACTACATTCAACATTGTATTGTTTTTTAACCCAACTCATACGAT
TCACTACTTGTACCAACAACAACAACAATAGCTAAAGATAAAAGAACTAGATATGTTTTACTGACTAGACATCCCTCTGCATTACA
GTGAAGTGGAGAACAAGTGATGACGACGATGATGTTTCACTCCTTGTTTCGAGAAGAACGATCCTTCCTATGTCCTCCAAGGATAC
GAGAGATCTGAAGACCTCTACTGAACGCTTGATTGAAGAGCATACGCGTCTGAAACTCCGACACAAAAGGAAACCAAGCCAAGAAC
GCCACTGGTGTGAACAGCAACAGTCCCATCACTATCTCATATCCACGAGCTAGTGTCCTCACTGATCCCCAGAACCCTGCTCTATG
CACCACTGGCTTACACGCTTGCGCAATCAAGAGCATACCCCAGCCTGTAGGCATAAACGCAAGGATGCACACAATAATATCTTGAA
TCGTCATGTGAGCAAGTGTGATCAATATCACAATGATTGCAATAAATGTCATGAATATTAGCCCCTTTATCAACCGGAACATCAGC
TGGAAACTCGCACTGAACTTCCTCCTTCCCACCGAGATAGTCTTCATCACAAACAATATCAAGAAAATCACCAGCCACGACACTCC
ATAAACCAGAAAGTTTTTAGTCCTCTCAGTAATGGTGAGATGATAAACAAGACCGTATTGATAGATAAAGAACCGCAGCGCCAACA
AAATCTCAACAACTATGCCACGCTTTCCCGAATGTCTGAGATGCTCTTGCTCTTCCTCCCACCACGACTCCCAACTCTTCTCTGCC
GGGACACCAATACCACCAATGTTGTTTATCCACTTGTTCCAATCAGTCCAATCATCGACGATTTTCTGCCATTCAAAACCAGATGG
ATTGAAGAGGAAGGGAGCGAATAGCCAAGTCCCGACCATGAACCACATAGATATGGTGATCAGAAGATACGCAAGCACGCCTCTGT
AAGAACTTCCGAAGATTTGGTACAAAACGAGCAGCAGCATCATCTCAAGCCCTTTTACAAAATGGCTCCTGGAATAGAGTCTGTAG
TTATCAGCAAATTTGGCATGAAAGACAACGAACCCTCTGCCTGTGGACCTATATTTGGCACCTCCGTGAAGTAAAGTCCTTCCGTA
GTAGTGAGTCTTTGTCCCAAGAGAGAATGTGAAGAACACTGGCGCCAGCTGAAGCTGCATCAGCACGAATTCACTCAAGGCGGTCC
TGAAACCCCTCTCTAATCCAATTTCCATGAGCATGGGTAAAGCCATGAGGAAACCAATCTGAACAAAGGACTGTGAGGCAAGAGCT
ATCTGCAAAGGTGTGTTGTCTCGGATGCCTTTCTGTGTACTTAATCCTTGTTCGAGCCCACTCAGCACAAGATAGAGACGCCCATA
AAGGAAGATATAGACGGTGAGAACGGTAATCAGGGTGCTGAAGTAAAAGCCAACAGTGGTGAAGTAACACGACATCATTCGGAAAA
AGTCGAAACGGTGTCCAAGCCTGTAAATGTCACGACTTAATGTTTGCTCTCCGTTTCCGTTAGCGATCTTGGCTTCAAACATCGAG
ATCTGATTAAGACCGACATCTCTTCCTTTACCAACTTGTATGTACTCATGATGAGTAACGTTTCCTTCACGAAGCGTAGAATTGAA
CCCTGCAAATATGTCTTCACTGAGATTGATTACTTTGGATGCTTTGCTAACACCACCTCTTGTTAGATGAAACAGTCTATCAAACA
CATCTGGATGACCATAATGGAAACGGACCCTCAAAGGATTTGCGAGCAATCTCTGACCAATGGTGACAAAACTAGTCTCTTGATTT
GACATGAACCAAGCAAGGGAGGAGACGGATCCAGTAAAAATATGTTCCCTGAGTCCAAGAATGGATGGATGCCTCACACCATCATG
CTTTGTAAGAAATTCTTGAAGCAAGTTTCTCATCTTTAACGCTTCCTCCATGTAATTATCCTGATTCATATCGATTGTCTGTAAAC
CTTCTCCACGAGAGAAAATGAT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| Q9LXT9 RecName: Full=Callose synthase 3; AltName: Full=1,3-beta-glucan synthase; AltName: Full=Protein GLUCAN SYNTHASE-LIKE 12 | 3238 | 0.0 |
| NP_196804 callose synthase [Arabidopsis thaliana] | 3238 | 0.0 |
| XP_002299147 predicted protein [Populus trichocarpa] | 3073 | 0.0 |
| XP_002528124 transferase, transferring glycosyl groups, putative [Ricinus communis] | 3054 | 0.0 |
| XP_002283298 PREDICTED: similar to Callose synthase 3 [Vitis vinifera] | 3046 | 0.0 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LXT9 Callose synthase 3 | 3238 | 0.0 |
| Q9AUE0 Callose synthase 1 | 2796 | 0.0 |
| Q9SL03 Callose synthase 2 | 2775 | 5e-313 |
| Q9SHJ3 Callose synthase 7 | 2427 | 1e-272 |
| Q9LYS6 Putative callose synthase 6 | 2390 | 2e-268 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9GLL4 Predicted protein | 3073 | 0.0 |
| B9GYK5 Predicted protein | 3069 | 0.0 |
| B9SQ55 Transferase, transferring glycosyl groups, putative | 3054 | 0.0 |
| A9PA73 Putative uncharacterized protein | 3011 | 0.0 |
| A2Q2S3 Glycosyl transferase, family 48 (Fragment) | 2995 | 0.0 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G13000.1 ATGSL12 (glucan synthase-like 12); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups | 3239 | 0.0 |
| AT5G13000.2 ATGSL12 (glucan synthase-like 12); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups | 3239 | 0.0 |
| AT1G05570.1 CALS1 (CALLOSE SYNTHASE 1); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups | 2797 | 0.0 |
| AT2G31960.1 ATGSL03 (GLUCAN SYNTHASE-LIKE 3); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups | 2776 | 3e-314 |
| AT1G06490.1 ATGSL07 (glucan synthase-like 7); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups | 2427 | 9e-274 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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