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Information for unigene UN24505

FASTA Sequence
Unigene ID: UN24505Length: 1452 SSR 
GTGTTACACAAACATCGACATACTTGAGAAGCAAGAAACTGTGAAATGTACAAGCTGACTCTGTCTTTTTTGTTCGTGATCCTTTC
TGGATTTATAATCCTATATATTCAAATTGATCAAAAACATAACGATCTGAAAACTAAACTTGCGTTCTCATGCGCTATTGTTAGCG
TTATCACTGTGACCTCCATTGCTGTCTTTACCATTAACTTGAGCCCTAGGTCTCCTATCTGCAGGGTCAACACCGTTCCCGTTCAA
GAGTTTGTGATTCTCTTCTTTGGTTCTGTCTTTTGAGCTCACCGGAAGCAACACCGTTGTCCGATCAGGCAGCTCTGGTAGTTTCT
TGTCGAGGAAGAACACAACCAAGTTCACTGTATACCAAGCAACCACAACATCGACTGTGTAATGTTTGCGTGACGCGATAATCAAG
AGGCTTTGCAATATAGCTATGACCCAACCTAACAGCTTTATGAACCTTTTAGAACCGTACTTCTGGTAAGTGAGGACAAAGACTAG
TGTGAATATCATATGAGACGAGAAAATCAAATCTCCACATCCGTATATCACACCACGAGGAAAGTTGAGCAAGAGAACCTCAAGAA
CGCTATGTGGCCGTGGCAACCTGGCAAGCTCAGAACCCTCTCGACAGTGATAGTTAGGGCCAGGAAGCTGAGTGGAATAGAACGTT
ATGACTCGGAGAAACTGACAAGCAACTAAGAAGGCGAGAACCCTGCACCATATCAACACAGTGTATATCTTCTTGCTTTTTATGAT
GAAAGGATGGAAAGTCCACAGGACAAAGGAAAGAAAAACACAAGTGAAGACAGTTTCACTTATATAGCTTTTATCTTGACCAAGCT
CCGGAAGAACAGTGTATCCAAGATCTTGAAGTGTTGGTCCTGGCCTATGAATATAATGAACTCCCCTAGCAGCTAAGCCATGAATG
TACTGGCAGAGAAGACCAGCGAGAAGGTATTTCCAGTTGTCGGCGAGGAGACCAATCTCTGTCGTTATTTCCGAACAAACTCTCTT
CCATAGCTTAGAAGCTTCGCGGCGAATGTAAAAAGTCATTCTTTTTATTGATGTTCTTTCACTTCCATACTATTCTTCACACCTCA
ATACTTTGTGTCATCACCATCATCAAAAAAAAAAAAAAAATCACCTTAACAAATTCTAGAGATTTTCAAATTTCTCTGTGGAACAG
AGCTTTTCAGCGGGGAAGAGGTCGTAACCCAAGTGGCTGGTTAGACTCAACGTTCGATCGGAGATCGGAAAAGCTGAAACGAGAAC
GACGGTGACAGCAAAAAGGGGAAAGAAAAAGAAACCAAAACGATCACAAAAGACGAGGGAGAGAGAGAGAGAGAGAAGAATCAAAG
AACAGAAGAGCTTTTAAGAGTAGAAAAGGGATTTTCCCTAAAGAGGAGAGGATCTGAGACAACGATGATCAACAAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_190970 inositol phosphorylceramide synthase 1 [Arabidopsis thaliana]15231e-166
XP_002876236 hypothetical protein ARALYDRAFT_906800 [Arabidopsis lyrata subsp. lyrata]15193e-166
AAK82549 AT3g54020/F5K20_320 [Arabidopsis thaliana]14092e-153
ACU24133 unknown [Glycine max]12981e-140
XP_002322937 predicted protein [Populus trichocarpa]12926e-140

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9M325 At3g54020/F5K20_32015237e-167
Q94AC2 AT3g54020/F5K20_32014091e-153
Q9SH93 At2g37940/T8P21.1513849e-151
C6TMJ1 Putative uncharacterized protein12989e-141
B9IG09 Predicted protein12924e-140

Arabidopsis top hits (Blast detail)Scoree value
AT3G54020.1 phosphatidic acid phosphatase-related / PAP2-related15243e-169
AT2G37940.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphatase-related / PAP2-related (TAIR:AT3G54020.1); Has 316 Blast hits to 316 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 213; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink).13854e-153
AT2G29525.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphatase-related / PAP2-related (TAIR:AT3G54020.1); Has 352 Blast hits to 352 proteins in 78 species: Archae - 0; Bacteria - 4; Metazoa - 245; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).10333e-112
AT2G29525.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphatase-related / PAP2-related (TAIR:AT3G54020.1); Has 352 Blast hits to 352 proteins in 78 species: Archae - 0; Bacteria - 4; Metazoa - 245; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).9742e-105

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  50%
 
111  25%
 
211  25%

Unigene MembersMember information