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Information for unigene UN24506

FASTA Sequence
Unigene ID: UN24506Length: 1460 SSR 
CAGAGCTACAAGTGAGGTTCATGTGCAGCTACGGCGGCAAGATTCAGCCGCGTCCTCACGATAACCAGCTTACTTACGTCAACGGT
GAGACCAAGATTCTCTCCGTAGATCGCGGGATCAGATTCCCCGTCTTGGCCTCCAAGCTCTCCGCCGTGTGCGGCGGCGGCGATGG
CGGAGGAGACGTTTTGTTTAAGTATCAGCTTCCGGGAGAGGATCTAGACGCGTTGATCTCCGTTACCAACGATGATGATCTCGAGC
ACATGATGCATGAGTACGATCGCTTGCTTCGTGTCTCGTCTAAGCCTGCGAGGATGCGTCTGTTCCTCTTCCCGGTTGTTTCTTCC
GGTGGGTTTGGATCGGAGGGCTCTATTCACTCGGATCGTGATCGGTTCGTTGAGGCGTTGAATACCGGTATTAACCGGTCTGAACC
GGAGAAAACCGTTACCGCTCCGGTGAATAGTGCTGATTTTCTGTTTGGGACGGAGAAAGTTGAGGTTTCTCCGCCGGCGGCGGCGG
CGGTACCGGTGGTGATGGAGCATCATCCGCCGGTGATCCAACCGGATCACGCGGCGGAGATGCAAAATCAAATGCTTGAGTTTCAG
AGGATGCAAGTTAGGGATCAAGAACAGTTACTTCAACAGCAAGAAGCTGTTTATAGAAGGAAGAGTGAAGACGGTTTAATCTTCTC
TCCGCCCTACGCACCGCCGCCGCATACGACGGTTCCACAAAACAATACACAAGCGCCTCCGATGACCTTCTGGCAAGGAAACCACT
CTAATCCAGGAGGCGTGTATCCAACAACAGGACCGGGATTACCGGAGCAGCCAGTATACATGGTTCCAGCTCCAACTCCAACTCCA
CATCCGGGAACCGTATACCACGCGCCGCCGCCACCTCAAGGGGTCTTGAGACCAGGACAAGGAAACCAAGGTGGCTACTACCCTCA
GGTACAGAGGATACCTTCGGATACTTACAGGGAACAACACCAAGCTGCCTACAACGTAGCTCAGCAGCCACCAGTAGTAGCAAGGG
CACAACAACAACAACAGCAACCTCCTCAGCCTTTTACCTCAGGTCCTCCTCCTCCTCAACCGCAATACTCTGCAGTTCCACCCCCA
CGTCAAGTGGTGGGATTGCCAGATACAACGGCGTATACTCAGATGAATTACGCTGGAGGAATGGGGAAACAAGTTTACTACACGGA
GGGACCACCTCCACAGTACCATGGAGGCGTTGGCTTACCTTTGAATGGTATGAGCGAATTTAGAACCGGACCAGACGGTAAGCCTG
TTGTTATTAACATGTCACCTAAAGTTTCATCACAGAGTTCAGATTCAGCAGTGTGATGAGGTAACCAGATTATTGTTAAAACCATT
TCAAGTTTCATCATCATCATCATCATATAATAGTGTAATTGATACTTTGGTATTTGAATGTCTCATAATAATATTTACTTTCGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002866615 hypothetical protein ARALYDRAFT_496651 [Arabidopsis lyrata subsp. lyrata]16295e-179
NP_201248 octicosapeptide/Phox/Bem1p domain-containing protein [Arabidopsis thaliana]8643e-090
XP_002298807 predicted protein [Populus trichocarpa]6985e-071
XP_002873411 hypothetical protein ARALYDRAFT_487778 [Arabidopsis lyrata subsp. lyrata]6941e-070
XP_002313211 predicted protein [Populus trichocarpa]6922e-070

Swiss-Prot top hits (Blast detail)Scoree value
Q9LJ64 Pollen-specific leucine-rich repeat extensin-like protein 11283e-006

TrEMBL top hits (Blast detail)Scoree value
Q9FGF3 At5g644308642e-090
B9GJ10 Predicted protein6983e-071
B9HN70 Predicted protein6922e-070
Q9LXC6 Gb|AAD14519.16591e-066
B9RX51 ATP binding protein, putative6492e-065

Arabidopsis top hits (Blast detail)Scoree value
AT5G64430.1 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein16793e-187
AT5G09620.1 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein6596e-069
AT2G01190.1 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein2941e-026
AT3G26510.3 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein2752e-024
AT3G26510.1 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein2752e-024

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
211  20%
 
203  60%
 
101  20%

Unigene MembersMember information