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Information for unigene UN24589
| FASTA Sequence |
| Unigene ID: UN24589 | Length: 1801 |
SSR | | AGGGCTTCGAACAAGCCATCTCATCTTCGCCGCCTCCGATTCGTGTAAAATCCGTCATAAAGCTATCAGCTTTCGCCAATCGATCG
CCAAACGATAACGGTATTTCCCTCCGAGCGATCTGGGTGAAGTGTCTGTGGAGTTTAGTTACCTTCGGGTCTTCGATTCGGGTCGG
GTTAGCTAGGTTAGGCGGTGTGGAGATCGTGACACGTGAGTTGAACACGTGGGAAGATGATGATGATGATTCGAGTAATAGACGCT
ACTTGCTAGAGATCCTCACCGCCTTGACGACGATACAAGAGAGCAGACGCGTTCTCGTTCACAACGGAGGGTTGAGAAGTTTCTCC
TCGAAGCGGTGCGTCGAGAGAGAGAGAGAGCTTGTCACGCTATTGGGTTGATCGGTGGTACTAGGGGGTGCAGGCGGTTGCTGGTT
GAAGCAGGAGTGGTTCCAGCTCTTGTGGAGCTCTTTCGAGATGGAGATGAAAAGACGAAGCTTTTAGCTGGTAATGCCTTGGGGAT
CATAGCGGGTCAGACCGAGTACGTTAGGCCTGTTACCGAATCTGGTCCCATTCCTTTGTATGTTGAGCTTCTCTCCGGAGGTGATC
CGATGGGGAAAGATATTGCGGAGGAATGTGTTTTGTATACTAGCTGTGGCTGAGGGTAATACTGTTTTGATAGCGGAGCAGCTTGT
GAGGATCTTGAGAGAGGGAGATGAGGAAGCCAAGTTTGCTGCTTCTGATGTGTTGTGGGATCTTGCTGGTTATAGGCGCTCTGTGT
CTGTTATTAGAGACTCTGGTGCGATGCCTTTGCTGGTGGAGCTTGTGAGAGATGGGTCGGTTGAGTTTAAAGAGAGGATTTCTGGA
GCTATAATTCAGTTGTGTTACAACGAGAACGACCGTGAGGCTTTGTCTGAGTCTGGTATGGTACCGATTCTGATTGAATGGCTGGG
GGATGAGTCTGAAGAGCTTAGGGATAATGCGGCTGAGGCGCTTATTAATTTCTCTGAAGACCAAGATGATTATGGTGGAGTGCGTG
AGGCTTTAAGCCGTCCTGTGATTCAGAGCAGACTTGCTAGAATCAGAGCCTCTAATGAACTTTTGGTTAGGTCAATGCGAAGGGCT
ACAATCGATCCTTATTTTCCCTGATGAGCAAATCCGACCTGTTTTGATTTATGTTTATAATATAAATTTCGAAAATGTTGTTTAAT
TTTTGTGACTTTTGTTTCCTTCACAAAAATTATTGACTTTGAATGAATATAAGATTACCGCATCATTGATCTTCCTTTACATGATT
GTGCATCCAGTGGTTGGACCATACGAATCATAGACTACTACTTCATACATATCAGAGTGTAGATGCTCATAGCAAATTGTGGAGCA
TTCAGCTAAGCAGCAATGTGCTGGAACGTTTTGATCTGTACCGTTGTTATCATCATCAGCAGTCTCCATGTTCTTGGAATTGTCGG
TATCATCCTCTTCTTGTGGCTTCTCCACCTGATCATCATCAGGACTCCTGATTCAGGAGTGAGAATTTCTGGGTTAAACTCTTCAA
GAGTCTCTAACATGGCGTAGCAAGCTTTCTTCCTCAAGGAGTCAACCAAACAAGCTGCATCAACTCCATCTCCGACCACTACAAGC
TCGTCCTCGAGTTCCCCTTCTATAGCCACAGAGATTACACCTGCAAGCAAGAGAAACAGGTTAAGAGTAGCTGTAAGCAAACGAAA
GATGATGCAACAAGCTGTTGGCAAGAGTCAGACCTTCATTTTCTTCTGACGGGAAGCTCTGTTTGGCAAAGTGGAGGATGA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002883233 armadillo/beta-catenin repeat family protein [Arabidopsis lyrata subsp. lyrata] | 934 | 3e-098 |
| NP_188652 armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] | 923 | 5e-097 |
| XP_002533042 ubiquitin-protein ligase, putative [Ricinus communis] | 628 | 8e-063 |
| XP_002276151 PREDICTED: hypothetical protein [Vitis vinifera] | 580 | 3e-057 |
| CBI26744 unnamed protein product [Vitis vinifera] | 580 | 3e-057 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LJY1 At3g20170 | 923 | 4e-097 |
| B9T473 Ubiquitin-protein ligase, putative | 628 | 6e-063 |
| A5BRE9 Putative uncharacterized protein | 470 | 1e-044 |
| Q3EB37 Putative uncharacterized protein At3g20180.1 | 165 | 3e-009 |
| B9HW77 Predicted protein | 143 | 1e-006 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G20170.1 armadillo/beta-catenin repeat family protein | 923 | 2e-099 |
| AT3G20180.1 metal ion binding | 165 | 1e-011 |
| AT3G54850.1 PUB14; ubiquitin-protein ligase | 121 | 2e-006 |
| AT3G01400.1 armadillo/beta-catenin repeat family protein | 116 | 7e-006 |
| AT4G05030.1 heavy-metal-associated domain-containing protein | 116 | 7e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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