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Information for unigene UN24608

FASTA Sequence
Unigene ID: UN24608Length: 1307 SSR 
TTTTTTTGAGAGCACACACTAAAATCGGAACCAAAAGCGCGCGAAGACCAAAAAAACCCTAATATCGTCGAAACATGCCAGAGCTC
CCGGAGGTAGAGGCGGCGAGGAGAGCGATAGAGGATAACTGTCTCGGGAAGAAGATCAACCGAGTCATCATCGCCGACGACAACAA
AGTGATCGATGGAATCTCGCCGTCAGATTTCCAGAACTCAATCCTCGGCAAAACCATCGTCTCTGCTCGCAGGAAGGGCAAAAACC
TCTGGCTCGAGTTGGATTCTCCGCCCTTCCCTTCTTTCCAATTCGGTATGGCTGGTGCTGTCTCTATCAAAGGTGTTGCTGTTACT
AAATATAAAAGGTCTGCTGTTAAGGAATCAGAGGAGTGGCCTTCTAAGTACTCAAAGTTCTTTGTTGAGCTTGATGATGGTTTAGA
GCTTTCATTTACTGACAAGAGGAGATTTGCCAAAGTTCGGCTTTTGGATAATCCGGTTTCTGTGCGTCCAATATCTGAGCTTGGTC
CTGATGCGTTGTTGGAGCCTATGACAGTTGATGAGTTTGCCAAACGCTTAGCTAAAAAGAAAATAACCATCAAACCTCTCCTGCTT
GATCAGGGTCTCATTTCAGGTATTGGGAACTGGATCGCTGATGAAGTGCTGTACCAAGCAAGAATCCACCCGTTGCAGACTGCTTC
TAGCCTCTCCAAAGAGCAATGTGAAGCCTTGCACACATCCATCAAAGAGGTCATTAAACATGCAGTTCAAGTCAGTGCTGATAGCA
AAGAGTTTCCTGTTGAATGGTTATTTCATTTTCGGTGGGGGAAGAAACCTGGGAAAGTTAATGGGAAGAAGATTGATTTCATCACT
GCTGGTGGAAGGACAACAGCTTATGTCCCAGAGCTGCAGAAACTTTTTGGGAAAGATGCGGAGAAAGCAGCCAAGGCTAAACCGGC
TAAAAGAGGTGCAAAATCAAAAGAAGACGATGAAGAAGAAGATGATAGTGCAAAACCGAGGAATCAAAAACCTAAAGGTCGTGGTA
AAAAGCCTGCACTGAAGAGAAAAACAAAAGATAGTGAGGACGAGGACGATGATGATGATGATGATGATGATGGTGGAGAAGATGAT
AGTGACGCTGAAGAGCAAGTTATAAAACCAAGAGGGCGTGGTTCAAAGGCCGCGATTAAGAAGAAACCTGAAGAGAAAGCTGGTAA
CAAGAAGCCGAAGGGAAGGAAAAGCTAAGAGCCCACTGACTAGAAGATGTTTTTTTTGTTTTCTGTTTTTTTCACAAACATAATAA
CTTGTTGCTTCTATGTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAC97952 putative formamidopyrimidine-DNA glycosylase 1 [Arabidopsis thaliana]15212e-166
NP_564608 formamidopyrimidine-DNA glycosylase [Arabidopsis thaliana]15193e-166
XP_002263635 PREDICTED: hypothetical protein [Vitis vinifera]12836e-139
NP_849798 formamidopyrimidine-DNA glycosylase [Arabidopsis thaliana]12334e-133
XP_002517673 formamidopyrimidine-DNA glycosylase, putative [Ricinus communis]12164e-131

Swiss-Prot top hits (Blast detail)Scoree value
A5UUN1 Formamidopyrimidine-DNA glycosylase2537e-021
A9B0X2 Formamidopyrimidine-DNA glycosylase2511e-020
A7NQM8 Formamidopyrimidine-DNA glycosylase2511e-020
A9WDC2 Formamidopyrimidine-DNA glycosylase2375e-019
B8FU83 Formamidopyrimidine-DNA glycosylase2242e-017

TrEMBL top hits (Blast detail)Scoree value
Q9SBB4 Putative formamidopyrimidine-DNA glycosylase 115211e-166
O80358 At1g5250015192e-166
O80359 AtMMH-2 protein12333e-133
B9RVA4 Formamidopyrimidine-DNA glycosylase, putative12162e-131
B9MWN2 Predicted protein (Fragment)11284e-121

Arabidopsis top hits (Blast detail)Scoree value
AT1G52500.2 ATMMH-1 (ARABIDOPSIS THALIANA MUTM HOMOLOG-1); DNA N-glycosylase15252e-169
AT1G52500.1 ATMMH-1 (ARABIDOPSIS THALIANA MUTM HOMOLOG-1); DNA N-glycosylase12331e-135
AT1G12830.1 unknown protein1165e-006
AT3G49140.1 EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: EMB2758 (embryo defective 2758) (TAIR:AT4G33990.1); Has 45368 Blast hits to 16108 proteins in 635 species: Archae - 60; Bacteria - 10333; Metazoa - 8211; Fungi - 3499; Plants - 14806; Viruses - 492; Other Eukaryotes - 7967 (source: NCBI BLink).1156e-006
AT5G15140.1 aldose 1-epimerase family protein1156e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  25%
 
113  75%

Unigene MembersMember information