RadishBase

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Information for unigene UN24618

FASTA Sequence

Unigene ID: UN24618	Length: 1381	SSR
GCAAGAGTGTAAGTGCCAACCTCAAGGAAGAGATAACACGGCTCCATTCACAAGGAAGCACCATCGCAAATCTTGAGGAGCAACTC GAGAGTGTTCAGAAGTCGATAGATAAGCTGGTGATGTCACTCACGAGCAATATCAATGCCGGAGATGAAACCACCCCAAAGACAAA GAATCATCATCATCATCATTCGAAGAAGAAGAAGCTTCCGCTGACGCCGAGCAGCGTATCCAACCACCGTCAGAACTTCTTGAAAT CTCCATGCTCTCCTCTTTCAGCTTCTAAGCAGGTCTTGGATTGTGATGCTGAGAACAAAGATCCTCAAGAGAACACAGCTAGTGGG ATGACGACTCCACAGAAAGGAGGAGAAAGCGGAGACGTGTCGTCAAGAGAGAGCACTCCAGGTGGGTACAGAAGATCAAGCTCAGT GAACATGAAGAAAATGCAGCAGATGTTCCAAAACGCAGCGGAGGAGAACGTGAGAAGCATAAGAGCGTACGTCACCGAACTCAAAG AGCGTGTAGCCAAGCTGCAGTACCAGAAACAGCTTCTCGTTCATCAGGTGCTCGAGTTGGAAGCGAACGAAGGAGCTGGATACAGC GCAGAGGACGAGGAAAAGACCATAGAGGAAAACGAAGAGCAGAGTCAAGTAGCGTGGCATATAACTTTCATAGAGGAGAGACAACA GATCATAGAGCTGTGGCATGTCTGCCACGTCTCCATCATCCACAGGACACAGTTCTATCTACTGTTCAAAGGCGATCAGGCAGACC AAATCTACATGGAAGCCGAGCTAAGACGGTTAACTTGGTTAGAGGAACACCTAACAGAAGTAGGTAACGCAACTCCAGCTCGAATA TTAGGTAACGCAACTCCTTCACGAAACGGCGATGAAACTGCAGTTGTATCTCTATCATCAAGTATAAGAGCATTGAGACGTGGGAG GGAGTTTTTGGCGAGAAGGATAAACTCGAGACTGACGCCTGAGGATAGAGAGGAGCTGTACATGAAATGGGAGGTGCCGTTGGAAA GGGAAACAGAGGAAGCTGCAGTTCGTGAACAAGCTGTGGACTGATCCTTACGACTCAAGGCACGTGCAAGAGAGCGCGGAGATAGT GGCGAAGCTTGTTGGGTTCTGTGAAAGCGGTAACATATCTAAAGAGATGTTTGAGCTCAACTTCGCCATGCCTTCGGATAAAAGGT GGAACATTGGCTGGGACAACATCTCCAATCTTCTTCATCTATGAAAAAAAACAGTTTTTTTTATTTGTGTTTGTGAATTATGTTTT CTTATCATTTTGATTTGTATTCCTTGTCACATTTGAACACAGTCATATCGTTTATCCGAGAATAATAGATTTTGACTAATGCTATT ATACC

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
XP_002321490 predicted protein [Populus trichocarpa]	1086	5e-116
XP_002318539 predicted protein [Populus trichocarpa]	1082	1e-115
XP_002279228 PREDICTED: hypothetical protein [Vitis vinifera]	1066	1e-113
BAB86283 kinesin-like protein NACK1 [Nicotiana tabacum]	954	9e-101
XP_002326146 predicted protein [Populus trichocarpa]	856	2e-089

Swiss-Prot top hits	Score	e value
No hits found

TrEMBL top hits (Blast detail)	Score	e value
Q8S905 AtNACK1 kinesin-like protein	1417	1e-154
Q9LPQ5 F15H18.12	1417	1e-154
B9IE63 Predicted protein	1086	3e-116
B9I2J8 Predicted protein	1082	9e-116
Q8S950 Kinesin-like protein NACK1	954	6e-101

Arabidopsis top hits (Blast detail)	Score	e value
AT1G18370.1 HIK (HINKEL); ATP binding / microtubule motor	1417	7e-157
AT3G43210.1 TES (TETRASPORE); microtubule motor	700	1e-073
AT2G21300.1 kinesin motor family protein	191	1e-014
AT2G21300.2 kinesin motor family protein	191	1e-014
AT5G66310.1 kinesin motor family protein	185	5e-014

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


10	1			33%


6	1			33%


9	1			33%

Unigene Members	Member information