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Information for unigene UN24659

FASTA Sequence
Unigene ID: UN24659Length: 1306 SSR 
AAAAAAAGAAGGCATGATTAAATAAAATTACAAAGAAAAATGGTTTAATTTGAGAACAAACTAGGGAAATAACGAACAGGATAGTC
AAGCATTTTAGGAAAGGAGTAAAAAACATAGGAATTGGTATGGAGATCATGTATCACCAGTGGTGAACCACAGCTATAACCAAGCA
ATAATTTGGTCTCGTCTACAATAGCTATTGGCAACAGTGCTGGATCTGGAAAATAAGGAAGGTCAAGAAAACAGGTTTTGGTGAGA
TCAATCGAACACATTTGCTTCCATGTCGTCGGCATGTTGCTGCTGTCGAGTGACCATATCACTTGGGTGCTGGTGGGATAGATTTT
TAGGGATACGCACAAGCGGTTATCGAGGATGCACAAGAGTAGAAAGCGAGGGTCAGGCACATGGGAAAAGGGGGCGTTACAGATGA
CTTGAAAAGTTTCCGTGTGAAGATCAAAAGACAACAACTTGGTTTCTACACACTCGGTTAACCAATAAAGGGACCCATGGAAATAT
ACAGGCTTCTGGCCTTCAATAATCCGATAGGGAGAAGCAGGGAGGACGTACCTCCAAGCATTAGTGGTAAAGTCGAAAACTTCACA
AGTGGTGACATTGTCTAGGCCAAACTCAGATGAGTTAAAGAGCCAAACCGGCTTGTATGTGCTCCTGACTTTGTCTTTGCCGAATC
CTAGCTGAGGTTCTCGGGTGTAACAGCCCCTTTTTTTGCGCGCGCGAGCGTCAGAGATGATGCGCGGTTGAACCCTCGAATGAAGA
AAGCTTCGACGCCATCTAGTGGCGGGATTAAAGACGACACTCGGGTTGCGGTTGCCGAAAAAACATACAAGTCCGTCACAAGCACC
ATAGCAAACCTTGTCGTTCCTTGTAGGGAACTTGAGGCTGCGAATTACACAAGACCCCACCATAATATTAGCTTCTTCTTCTAATA
TTTCTTCTTCTTCTTCTTCATCACCAAGCCAGGTCACGTATAGGATATCTGGACCTCGTGATTTCCTCGTGATCATCACTACTTGT
CTCTGTTTGAAACTCGGGGACTCGATTGTCGATTTCCACGTCTTTGATACACGCTTGAATCTCAGCAGAGACACCACAGGAAGTTT
CTCCAGGATGAGCTCAACCACATCGTGTGGTAGCACTTCTTCGCCACGATGTCTTTTCAACATCATTGTCTTATTGTTATCTCTCA
ACACACCATCCATCGATGCTTTCCTCATCCCCCAAATGATCGCCTCCAATCCTTCTTCCAATCCCTCACGAATCAATTTATTCCTT
TTTCTTTAATTCTGTA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002880773 predicted protein [Arabidopsis lyrata subsp. lyrata]9072e-095
XP_002875386 predicted protein [Arabidopsis lyrata subsp. lyrata]8033e-083
NP_172436 F-box/LRR and kelch-repeat containing protein [Arabidopsis thaliana]7551e-077
XP_002889905 predicted protein [Arabidopsis lyrata subsp. lyrata]7442e-076
XP_002892632 F-box family protein [Arabidopsis lyrata subsp. lyrata]7102e-072

Swiss-Prot top hits (Blast detail)Scoree value
Q7X7A9 F-box protein At1g112707672e-080
O04488 F-box/LRR-repeat/kelch-repeat protein At1g096507554e-079
Q9LX89 F-box protein At5g103406963e-072
O80777 F-box protein At2g342804096e-039
Q9LPW2 Putative F-box/kelch-repeat protein At1g128703872e-036

TrEMBL top hits (Blast detail)Scoree value
O49464 Putative uncharacterized protein AT4g194605683e-056
Q9M121 Putative uncharacterized protein AT4g016403937e-036
Q9ZSI2 T15B16.15 protein3937e-036
A0MDV8 Putative uncharacterized protein (Fragment)3292e-028
Q9LE79 F5O11.243112e-026

Arabidopsis top hits (Blast detail)Scoree value
AT1G11270.1 F-box family protein7672e-081
AT1G11270.2 F-box family protein7672e-081
AT1G09650.1 F-box family protein7554e-080
AT5G10340.1 F-box protein-related / SLF-related5672e-058
AT1G14430.1 glyoxal oxidase-related5592e-057

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
191  25%
 
122  50%
 
181  25%

Unigene MembersMember information