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Information for unigene UN24725
| FASTA Sequence |
| Unigene ID: UN24725 | Length: 1258 |
SSR | | GGGTTCTGATTTCGTCTTCCCTTCTCTGTAACGTCGTCTCTCTTCTACAAAAACTCTCAGAGAGAGAGAGAGAGAGAGAGAGAGAG
CAACAGAGACGATAGAGATTCTTCAACTATCTCGCGATCTGTAAACAATCGCTGAAGAATCTCTGGAGATTCAGGTGTTCTTCGAC
TTTGTCCGAGTCTCGAGCTGATTTACAGCGGACGATGAAGCTCATCATCGTCTAGAGATAGCTACGAAGCTTTTCACTTGCGATTG
AGATTAAAAAATGACGACGACGAAGATGAAAGGAGGAGGAGGAGAGCATTCTTCTTCTAGAAGCTTCGCGTCTCGTAAATGGACGT
TGTTACTCTGTTTAGGGAGCTTCTGCGTCGGAATGTTCTTCACCGATCGGATGTGGAGTGTTCCGGAATCTAGAGACGTCTCTCGT
CCATCAGTAACCGAAGCTGAGAGATTAAAGCTCATATCCGAAGGCTGCAATCCTAAATCTCTTTACCAGAAAGAAGTTAAACGAGA
TCCTCAGGCTTTGTTTTCACAAGTATCCAGTACTCACAACGCTATACAGACATTGGATAAGACCATTTCGAGCTTAGAGATGGAGT
TAGCTGCTGCAAGGTCAGATATATGCCATTTCAAGAGACTTGGCTTCTTACATATCAATCAATCAGCATGTTCTACACAAGTATGC
GAACGAAGATGTTTCCTTAGGAGCTTGGTTTATTGGGATTGATGTTAAACACATTGATGATAGAAGATTATGCTGCGGCACTCCTC
CTGATTGCGAATGGAAAGCACAAGCTGGGAACATATGTGTAGCATCGTTCGACTGGACATGCAGCGGAATCTGCAGATCAGCAGAT
CGTCTCAAAGAGGTTCATAGACGGTGCAGTGAAGGCGAAAACGCTCTTTGGAGTGCCGCCTTTTGACATATAAAAAGACACACGGT
TGTTCTGCTCCCAAAAGAAAACAGCCCAAAGATAAAGAGGAAGGTCAAGCAGAGATACAATTCTTTTTGTTTTCTTTGCTTCTTAG
TATCATCAAGAGATATGATCCACACTTTACACTTTTTTGTAAACATAGGTACATAGAACTAGAGATAAGTGTGAAAAAAATCTCTG
GCAAGAATCATATGATTGGGTTTGTTATTTTCAGATGACTTGGAAATGAAGCATCTGTTACATCAATACAACAAAACTATGCCATG
TTTATAACCGCATCTGACCAAGTATCAGATTTTTGAAAATTTCCGTTTATTAGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_172009 putative beta-1,3-galactosyltransferase 2 [Arabidopsis thaliana] | 549 | 8e-054 |
| NP_001077462 putative beta-1,3-galactosyltransferase 2 [Arabidopsis thaliana] | 549 | 8e-054 |
| XP_002892271 galactosyltransferase family protein [Arabidopsis lyrata subsp. lyrata] | 549 | 8e-054 |
| XP_002524194 Beta-1,3-galactosyltransferase sqv-2, putative [Ricinus communis] | 540 | 8e-053 |
| XP_002302876 predicted protein [Populus trichocarpa] | 531 | 9e-052 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| A8MRC7 Probable beta-1,3-galactosyltransferase 2 | 549 | 3e-055 |
| Q9ZV71 Probable beta-1,3-galactosyltransferase 3 | 528 | 9e-053 |
| Q8LEJ9 Probable beta-1,3-galactosyltransferase 4 | 477 | 7e-047 |
| Q9MAP8 Probable beta-1,3-galactosyltransferase 6 | 459 | 9e-045 |
| Q6NQB7 Beta-1,3-galactosyltransferase 7 | 450 | 1e-043 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SDX5 Beta-1,3-galactosyltransferase sqv-2, putative | 540 | 6e-053 |
| B9GTX3 Predicted protein | 531 | 6e-052 |
| B9IAF8 Predicted protein | 524 | 4e-051 |
| A5BEV2 Putative uncharacterized protein | 523 | 5e-051 |
| B9SV83 Beta-1,3-galactosyltransferase sqv-2, putative | 519 | 2e-050 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G05170.1 galactosyltransferase family protein | 550 | 2e-056 |
| AT1G05170.2 galactosyltransferase family protein | 550 | 2e-056 |
| AT2G32430.1 galactosyltransferase family protein | 529 | 6e-054 |
| AT4G26940.1 galactosyltransferase family protein | 478 | 5e-048 |
| AT1G32930.1 galactosyltransferase family protein | 460 | 6e-046 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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