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Information for unigene UN24738
| FASTA Sequence |
| Unigene ID: UN24738 | Length: 952 |
SSR | | GCATTCAAGTGACTAATGTTGAAAAGAATAGGTACCAAACAAAAAGAGGGACTTTATGTTAATGTTACAACATACAAAAGCTTTAT
ATACACCAATTTGTGGAAAGCTTAATCCTTCTCATCTCCCCCTCCTTCCCCTTTTTATTTTCAACGAGGAGCAGAGGTAACAGCAA
GCAGAAGTGAGAGAGAGAGAGAGAGCCATTCTTCTCTTCTGACAGAATCTCAGTCCTGACGTATAACAAGCAAAAGGAATGGCAAC
CTTGTGTCTTTAAAAGCGTACCAAGTTGCTCTACTCACGAGCTTCTTCTTTTTTTTTTTTGCCTGAGAGTGCAAGTGAGAAACTGT
CATTGGTTGGTGAGAAGTTTTTGGTATCTTTGTATCCTCTTTTCCCTAATTAAAGAACCACTGCTTTGGTTCAAAACCTTCCTCCT
CTTCACACGATGCAATACATCCTCTGTGTCAAATACATACGAGACCTTTGAAGAACTGCATGTTATCTTACACTCCAAACCATTAT
TGATCTTAACTCGATCCGTGGTAGAGAGTTCATCGTCATCACCATTTTTACGCTTATTCCGTTTTAGATATATTCGAGGGTTCTCT
TTCACATTAGCTTGGCAGGAAAGGAACTTGTTTTGGAGGTAAGCTGAAAAATTTGGGTCCATGGAAATGGATGTCACATCAGGCTT
ATCATGTCCATAGTCCAGAAGCTGAATAGATAATGTTGTTGGTGCTGAAAGTTTACATTCAATGCGGTATACATCTTCATCAGGAA
GAAGAACACGAGCGTTTTAATAATAAACCTCATTCATATACTTTTCAGGCTTTCTTGATTTCTCATATGAATACAACTGTTGTAGT
TTGTTGTCCATCTCATCAGCTGCTACTACTTGGATATGCTTGATGAGCTTGTAGATAAGTTTGTCTAATGTGAAGAGAATATATGA
CTGTGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| O04539 RecName: Full=Paired amphipathic helix protein Sin3-like 4 | 788 | 1e-081 |
| NP_177163 paired amphipathic helix protein Sin3-like 4 [Arabidopsis thaliana] | 788 | 1e-081 |
| XP_002887272 paired amphipathic helix repeat-containing protein [Arabidopsis lyrata subsp. lyrata] | 777 | 2e-080 |
| AAB61107 F20P5.21 gene product [Arabidopsis thaliana] | 701 | 1e-071 |
| BAE99612 hypothetical protein [Arabidopsis thaliana] | 643 | 6e-065 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O04539 Paired amphipathic helix protein Sin3-like 4 | 788 | 4e-083 |
| O48686 Paired amphipathic helix protein Sin3-like 3 | 643 | 3e-066 |
| Q9LFQ3 Paired amphipathic helix protein Sin3-like 2 | 517 | 1e-051 |
| Q9SRH9 Paired amphipathic helix protein Sin3-like 1 | 468 | 5e-046 |
| Q9XIE1 Paired amphipathic helix protein Sin3-like 5 | 421 | 2e-040 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9HU88 SIN3 component, histone deacetylase complex | 617 | 4e-062 |
| B9S2H7 Putative uncharacterized protein | 606 | 8e-061 |
| B7F7C1 cDNA clone:J033007H10, full insert sequence | 551 | 2e-054 |
| B8ACV2 Putative uncharacterized protein | 551 | 2e-054 |
| B9EYU3 Putative uncharacterized protein | 551 | 2e-054 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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