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Information for unigene UN24765

FASTA Sequence
Unigene ID: UN24765Length: 1200 SSR 
ATCTATGCAAATGTGTTATGTAATAAAAACTTCATTTCCTATAAACTCGAATCTCACAAGTTGCACATATATATATAACTACTACA
CACACAAGCATTAACACACTCATCACACAGCACAAAAAGGAGAGAGAAGGGAAGACACTATGATGTTCCTGGCAGAAAGAGAGAAA
GTAAAAAAAAAATCTGCTAGCTTAACAATACAAGTCTCCTGGAGCTCCGTTTCTTGATGATCATGGTCTACCTTTCTTCATCCTTG
CATCTCGCTGGTTCCGGAAGTGGCTGAAAAGCTGCTGTGCCTTCTCCTTTGCTCTCTGTGTACCAGACTGAGACAAGGCAACAAGT
GGAGGTATTGCGCCTTCTTGCAACACCAATGTGCAAAACTTGGGACTGTTCAGACACAACTGAAGCAGCACAGAAGCTGCGTTCTC
TTTCCCTCTCTGAGACCCTGAATCAACCGTCTCAACAAGCAACGGAATTCCACCTTCCCTCACAATTGCTTGACGCCCTTCTCCAA
CCGCAGAAAGATTCGCAAGAAGAGCAACTGCTTTATCAACCATCTCTAGATCCGGGTTTAACAGCTCCACAAGATACTTAACCGCC
TTAGCTTGCACAATACGAGCCTTGTTCTCATGAGTTATCGAGAGGTTGAACAACGCAGAAGCAGCATCTTTCTTCCCTCTGAATGT
TCCCTTTCCAAGAAGATTCACCAGAGCCTGTATAGCTGCTTTAGACTGTCCTATTCTTTCCCTGTTGATTTGCAGAACAGATAGAC
TGAACAACGTTGCTGCTGAGTTCTCTTTGGCTCTGTCATTACCTGTGTTCAAAACGTGAACAAGCGGTTCTATAGCCCCAGCTTCC
GCAATCATGGCTTTGCTTACTTCGCTGATCGAAAGATTCAGAAGAGCAGTGACTGCGTGTTCTTGAGTTAGCTCTTCTTCTGAGTA
TAGAAGTGACAGCAGTGGAGTGATGGCACCGCAACGCCCAATGTGAACACGGTTTTCAACGTTGTTAATGGTAAGATGACGTATCT
CAGCAGCAGCAGCAGTCTTCTCTTGGCTAGATCCATCTTTAAGATCTTGTACCAGTTTTATGGTATGTGAAGTCATCATTGTTCCT
GAATCATACTCATGATTAACGTTGCTTGAACTTTCTGAGTGTTTCTTAGGAGACATCTCACTGTAACTTTGGTGGTTCTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002878000 armadillo/beta-catenin repeat family protein [Arabidopsis lyrata subsp. lyrata]13751e-149
NP_191039 U-box domain-containing protein 3 [Arabidopsis thaliana]13598e-148
NP_001078286 U-box domain-containing protein 3 [Arabidopsis thaliana]13598e-148
BAC43212 unknown protein [Arabidopsis thaliana]13581e-147
CAB77599 putative protein [Arabidopsis thaliana]12674e-137

Swiss-Prot top hits (Blast detail)Scoree value
Q8GWV5 U-box domain-containing protein 313594e-149
O22193 U-box domain-containing protein 48111e-085
Q5XEZ8 U-box domain-containing protein 27851e-082
Q8VZ40 U-box domain-containing protein 145521e-055
A2ZLU6 Protein spotted leaf 115252e-052

TrEMBL top hits (Blast detail)Scoree value
A8MQL6 Uncharacterized protein At3g54790.213596e-148
B9H8N4 Predicted protein10235e-109
B9T1B5 Ubiquitin-protein ligase, putative9993e-106
B9GS07 Predicted protein9941e-105
B8BA51 Putative uncharacterized protein8641e-090

Arabidopsis top hits (Blast detail)Scoree value
AT3G54790.1 armadillo/beta-catenin repeat family protein / U-box domain-containing protein13593e-150
AT3G54790.2 armadillo/beta-catenin repeat family protein / U-box domain-containing protein13593e-150
AT2G23140.1 binding / ubiquitin-protein ligase8522e-091
AT5G67340.1 armadillo/beta-catenin repeat family protein / U-box domain-containing protein7851e-083
AT3G01400.1 armadillo/beta-catenin repeat family protein5932e-061

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  25%
 
94  50%
 
211  13%
 
71  13%

Unigene MembersMember information