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Information for unigene UN24820
| FASTA Sequence |
| Unigene ID: UN24820 | Length: 1130 |
SSR | | GGAGCATGAGAGGATGGTTAGAGAAGAGTCTTGGCGAGTGCAAGAGATTACTCGTATCAACCGCGAACGCGATATCTTAGCTCAAG
AACGCTCCATGTCCGCGGCTAAAGACGCCGCGGTTATGGCGTTTCTTCAGAAATTATCTGAGAAACCAAACCCTCAAGGTCATTCA
GTTCCTCAACCGCAACCGCAACCTCAACCGCCTCCATCGCAAATGCAGGTTAATAATAACAACAACCAGCAAACTCCTCAACCGCG
GCCACCTCCTCCCACTACGCAGCCGACACAGCCAGTGACACCAACCATAGACACTGCGAAAACAGACAATGGTGATCAGAATATGA
CTCCAGCGTCGGCCTCAGCGGCAGGAGCAGTGAGCTCATCGCGGTGGCCGAAAGTGGAGATAGAGGCATTGATAAAGCTGAGGACG
AATCTTGATTCAAAGTATCAAGAGAACGGACCAAAAGGACCGTTGTGGGAAGAGATATCGGCTGGGATGAAGCGTTTAGGGTTCAA
CAGAAACTCAAAGAGATGCAAAGAAAAATGGGAAAACATAAACAAATATTTCAAGAAAGTCAAAGAGAGCAACAAGAAACGCCCCG
AAGACTCCAAGACTTGTCCTTACTTTCACCAGCTTGATGCTTTATATAGGGAGAGGAACAAGTTCCACACTAATAACAATGTTGTT
GCATCTTCTTCCTCGACTTCCGGTTTAGTTAAACCGGATAATTCGGTTCCTTTGATGGTCCAACCGGAGCAACAATGGCCTCCGGC
GATGGCAAGTACTACAATGACGAGTACAGTTGCTGCAACGGCTCAGCCCGGTCAACATCCTCCTCCTCCTCCTCAGCCGTTGGATC
AGAACTTTGATGATGAAGAAGGCACGGACGGAGAAGAATACGACGATGAGGAAGACTACGAAGAGAATGAGGAAGAGGAAGGAGGT
GAGTTTGAGCTTGTGCCGAGCAATAACAACAACAACAAGCCGACGAATAATATGTGATGTGGATGATGATTCGGGTTCGAGTGGGG
TGTGGACTTGTGGTGAAAGATTGGTAGTAATAATATTTTTAAAGTTTTGATACAGAAGAAAATGATTTATATATTGGAAAGGGGTG
GTTTCTTTTTTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002887660 hypothetical protein ARALYDRAFT_895569 [Arabidopsis lyrata subsp. lyrata] | 1338 | 2e-145 |
| NP_177814 putative trihelix DNA-binding protein [Arabidopsis thaliana] | 1152 | 8e-124 |
| XP_002302180 predicted protein [Populus trichocarpa] | 854 | 3e-089 |
| XP_002532429 conserved hypothetical protein [Ricinus communis] | 833 | 8e-087 |
| AAL65124 GT-2 factor [Glycine max] | 744 | 2e-076 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9C6K3 GT-like trihelix DNA-binding protein, putative | 1152 | 5e-124 |
| B9GTJ3 Predicted protein | 854 | 2e-089 |
| B9T2G0 Putative uncharacterized protein | 833 | 5e-087 |
| Q8W240 GT-2 factor (Fragment) | 744 | 1e-076 |
| B9T2F9 Putative uncharacterized protein | 710 | 1e-072 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G76880.1 trihelix DNA-binding protein, putative | 1321 | 7e-146 |
| AT1G33240.1 AT-GTL1 (GT2-LIKE 1); DNA binding / transcription factor | 540 | 3e-055 |
| AT1G76890.2 GT2; transcription factor | 469 | 5e-047 |
| AT5G28300.1 trihelix DNA-binding protein, putative | 255 | 3e-022 |
| AT5G47660.1 DNA-binding protein-related | 252 | 7e-022 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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