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Information for unigene UN24829

FASTA Sequence
Unigene ID: UN24829Length: 1401 SSR 
GGGCTCGTTCTCATGGCAATACCCAATCACATTCAAGAAATTCCTGTGGTCTGCTTTTGCTAACTTACGAATCTGCAGAAACAGAG
ACGAATCATTTCTCCAGTGTTCAAAAACAAAGGATAAACCAGGTTCTTCTGATACCTTTTGTAGCAGCTGTGTTTCCATATCGGTA
GACCAGTCTGCACGAGAGCCATCCGCGATGGAGACAACAGCGATTTCACCACCGGTGGATAAAGTCCCTTTATAGATGGTACCGTC
TGAGAAAGAGCCAATGATGTTGCTGAAATCTTCACATGCTGCTTGTAGCTCTGACAGCTGCAGCCTAGGAACATCTGCGGAAGTGC
AAAACTATAGAGTCAGAGAATGAAGAGAGAAGAATGAAGAGTGTGTGTGTGTGTGTTGCCTGTGATAAGAGCATCTTGAAGCTGGC
CACTGTTGTTGGTCCAAGGCTTGATTGGAATTTTTCTGGTGTGGATAAGAAAGAAGATGGTTAATGCCACTGAGACTGTGAATACT
CCAACAACTATGCCCACGATCATAGAAACATGAGTCTTTTTAGTTTTTGGAGGCGGACGTGGAGGTGGAGACAGAAGTTGGGGAGG
AGGAACAGAAGGTGGGTTTGGGGTTTGTGCTGTCCTAACACTACTAGGAGGAGGGCTCGTGGTTCCATCTCCACCTACTGGTGTTT
GAGTTTCTGGTGCTGGAACCGGTTTTGTGGAGCCTGCAAGCGCTAGATCAGGAGATGGAGGGGAGGCACCCACAGCAGGACCTTTT
CCCGGAAGAGGTGGTGTCTCTACCAAGCTGCGACGGTTCCAAGAAGCTTCAGATTGGATGAATAAGTGATCTTGAGAAGGATCAAA
GACTTCTGCAATTTTAGAAATGAGCTATCATAATCCAAAGACACACACAAAAGATTGTAGAGAGAGATGAGGATGGAATAAAGTAC
CTTGAGTTTTGAGATTCAGAGGAAGAAAGGTGAGGAAGATGATGGAGAATGCTGTTCGGAGATTGATTTTCCGCCATCCATGAGAA
CTCATAGGAGGTTTCATTTAGCTTCTGTGCGCTCTTTCTTCCTGAAAGGAGAAGGAACAAGAGGGGGAGCAGTTGAAGATTGAAGT
CGTCTCTCAGGGACAAGGAAGACTAATCAAAGGTTGCTACTCTTTCAACCTTTTTCTTAATTTTAAATCTCTTATTTATTCCAATC
ATACAACTTGTTGACTTGTATGGTTTTTATGTCGTGTACCTCTATTTAGTCTATGTCGTAAATGTATCTAGGTTTCCTTTCACTGG
ATATTTAGTCTCTTTTTTGTTAAATCTTGTTGCTGTGGCTAAATCAAGTTGAGGGGTTTTGTGGTATGACTTGTACTGGGGGATAT
TTTAAGAGTATGGCTAGTTGTGACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002864580 kinase family protein [Arabidopsis lyrata subsp. lyrata]4119e-038
NP_851216 protein kinase-like protein [Arabidopsis thaliana]3732e-033
NP_200662 protein kinase-like protein [Arabidopsis thaliana]3689e-033
NP_974960 protein kinase-like protein [Arabidopsis thaliana]2917e-024
AAO59488 ser-thr protein kinase [Gossypium hirsutum]2272e-016

Swiss-Prot top hits (Blast detail)Scoree value
C0LGQ4 Probable LRR receptor-like serine/threonine-protein kinase MRH11661e-010
C0LGU7 Probable LRR receptor-like serine/threonine-protein kinase At5g458401596e-010
C0LGH8 Probable LRR receptor-like serine/threonine-protein kinase At1g634301524e-009
Q0GNC1 Inverted formin-21453e-008

TrEMBL top hits (Blast detail)Scoree value
Q9FGG7 Similarity to receptor-like protein kinase3732e-033
Q501H6 At5g585403686e-033
B3H4S2 Uncharacterized protein At5g58540.32915e-024
Q84U00 Ser-thr protein kinase (Fragment)2271e-016
B9HNB7 Predicted protein2119e-015

Arabidopsis top hits (Blast detail)Scoree value
AT5G58540.1 protein kinase family protein3738e-036
AT5G58540.2 protein kinase family protein3683e-035
AT5G58540.3 protein kinase family protein2913e-026
AT5G07150.1 leucine-rich repeat family protein2161e-017
AT3G56050.1 protein kinase family protein1892e-014

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  67%
 
81  33%

Unigene MembersMember information