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Information for unigene UN24846
| FASTA Sequence |
| Unigene ID: UN24846 | Length: 2014 |
| SNP | TTTTTTTGTTGCTCTCTTCTCCTTTCGGTTTGAGCCTATTTGGATTTGTTATTTTTCTCTGTCTATTTCTGACATTCTGGGATCTG
AGAAGATCGGAATCGAAAAAAATCCTGATCTTTGCTCTAGAAATGGGTTCTTGTTCGGACAAGTTGTTCAACAGAGAGAGAACAGT
ACATGAGATTCTGGGTGGTGGCATTTTTGCAGATGTGATCTTGTGGAGGAACAAGAACGTGAGTGTTGGTATAGTTACAGTAACAA
TAGGATCATGGATGGTGTTTGAGAGCTTTTCTTACACAATCCTCACTCTTCTTTCAAGTGTTCTTCTCCTCTTGCTCTCTATCCTA
TTCCTCTGGTCCAAATCTGCATCTATTCTCAACAGGCCGTCACCTCCATTGCCAGAGTTTCAAATAAGTTAAGAAATGGCTGACGA
AGCTTCCAAGTTGTTACGCTTCCATGTGAATAAACTGCTACAAGTCTCGTATGATACTGCGATGGGGAGAGACTCAGAGTTGTTTA
TCAAAGTAGCTGTCTATCTGTTTCTCATCTCATTTATTGGAAGCCTCATGGATTTTCAGACACTTTTCCACACCGGGGCCTTGGTA
GTAATGACAGTTCCAGCTTTCTACGAGAGATACGAGGATTACATAGATGGACATCTGTTGTTCATCTACAACAAAGCTAAAGAGCT
TTACCTTAGATTCCAGATATGGGCTTATCCGGAAAAAAAAACTAAGCTGAGAACCTCTTCTTCAAGAGTTTCTTCTTTTTTATTTC
TTGATTTTGTAAAAGAAAAGACGAAAATGTATGTTTTTTTTCTGATAAATGTTTGAATGGTACAGCCAGAATATGGGCAACCCACA
GAAATTTATTTCACAGTTTTGCTTGAAACTGTGTTGCCTCTCTCTCTCGACCACCGAAATTAAGAAGAGAACAATGTTTCTCTTAT
TCTGTCTGCTTAAAATTTTGTGCCTCAGTACTATTTCTTGGACGATTCTAGTTCCCGGACATACTTCTTTGCCTGTTCGAGGGTCA
AAAACATGATGACGTTCCATGAACCAAGACGTCCAAAGTTGGGGATGAAACCCTTGTAAAATGCCATAGGACCGTCAGCCTTCAGA
GTTTTGACGAAGCAGTCGATAGTGCCTTTGTAAGAAGGATCTCCCATCATTCTCGACTTAACCACGTCAACAGGGGAACCAATGCA
GACAGCAAAGAATCCTGCTCCCAATCCAGATAGAATATGCGTGACAATGTTATCAGTGAACCCCGGAATCTTCAAGATTGTCTGCT
TCACTTGATCGTAACTCGCTAATTCAGCAGCATTGATGATTGCGTTTCTAGCAACATTAGGTCCAAGACCAGTCCAAAGTGCTCTG
ACTCCTTCCTGTCTGACAATGGTTGAATAGGCATTCAAAGATCCAGTATAGCGTCTTGGAACACCTGCAGCTAGTTTCCCTTCAGC
CTGAAGTCTAACTTTCACAAGATCAGTGGGATTCGCAACCATGATACCCAGAGCACCTGTGGTCAAACCAGCAAGGATCTTCTTGC
TCAAAGGAACATCGCCTACATGGTCTTTCCCAACGTACAAGTTTTTGACCGGCTCATACATTCCGATCCTAAGACCTCCAAAGAGG
CATTGACGATGTAATCCAGGTACAACACCTTTCCATAGTGAACGAAGCCCTTCTTCTCTTGCTATGGTACCAACAGTCCCGAGTAA
TCCACGATACTTAGGCAAAGTAACATCTCCAGCAATGGCAGACTTTTGGAGCTGAAGCCTCACTTTCGCAGTGTCCAACGGAATCG
TACATACCTCGCCGACGCAGGCAGCGAAAGCACTGCAGGCGAATGTTTTAGGCAATGAAAGGTCAGATTTGCTATCAGATACCATC
CTTCTTCGATCCAGACAACAACAACAAAAAAAAAAAGCTAATCCGAGGAATGAAAAACGAGAGAGAGAGTATCGAACACAGAGAGA
ATCTCGAGAACAGTGACGACGATTACGACTATGCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_190979 uncoupling mitochondrial protein 1 [Arabidopsis thaliana] | 1485 | 4e-162 |
| CAA11757 plant uncoupling mitochondrial protein [Arabidopsis thaliana] | 1476 | 5e-161 |
| XP_002527871 mitochondrial uncoupling protein, putative [Ricinus communis] | 1353 | 8e-147 |
| XP_002308202 predicted protein [Populus trichocarpa] | 1347 | 4e-146 |
| XP_002322953 predicted protein [Populus trichocarpa] | 1341 | 2e-145 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9M392 Reticulon-like protein B12 | 802 | 3e-084 |
| P70406 Mitochondrial uncoupling protein 2 | 695 | 7e-072 |
| P56500 Mitochondrial uncoupling protein 2 | 695 | 7e-072 |
| Q3SZI5 Mitochondrial uncoupling protein 2 | 694 | 9e-072 |
| P56501 Mitochondrial uncoupling protein 3 | 694 | 9e-072 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O81845 Mitochondrial uncoupling protein | 1485 | 3e-162 |
| O65623 Plant uncoupling mitochondrial protein | 1476 | 3e-161 |
| B9SPF2 Mitochondrial uncoupling protein, putative | 1353 | 6e-147 |
| A9PAU0 Predicted protein | 1347 | 3e-146 |
| B9IG38 Predicted protein | 1341 | 1e-145 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G54110.1 PUMP1 (PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 1); binding / oxidative phosphorylation uncoupler | 1485 | 1e-164 |
| AT5G58970.1 ATUCP2 (UNCOUPLING PROTEIN 2); oxidative phosphorylation uncoupler | 1132 | 1e-123 |
| AT5G58970.2 ATUCP2 (UNCOUPLING PROTEIN 2); oxidative phosphorylation uncoupler | 891 | 1e-095 |
| AT3G54120.1 reticulon family protein (RTNLB12) | 802 | 2e-085 |
| AT2G22500.1 UCP5 (UNCOUPLING PROTEIN 5); binding | 520 | 1e-052 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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