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Information for unigene UN24847
| FASTA Sequence |
| Unigene ID: UN24847 | Length: 707 |
SSR | | GGAGCAAACGTTGTCCATGTGATATTATATCAAGAAAGATACATTTCAACCAATAGTGATTGTCATGAACCAAAACATTTGGAAAA
TTAGCCAGTTTCAGAAAATAACTGAATTAAAAATTCTATTAAGAGAGTTTGGCTTCCGACCGAAGTCTCAAATAGTTGTAGTAGAG
GAGGGAGCAGGCTTCATGTTTCAGAACCTGTGCTCGAGTTTCTCCTGTTCCTGGAAGTGCTGAGCATACGAGTAGGTTCCGAGGAC
AGGAGTGAGGAGAAGAGTGGCGCTGATCCAATTCTCGGAGACCTTGTGGTGAATCTTCTCGGGGAGATCCTTCCAGAGTCCGGTCA
TTATCTTCTGCTGGAACGGCGAAAGCGCGTATACCACCGCCTTCAACTTCACCGGCTGCTTCCCCATCTCTCTTTTTTCTTCTTCT
TCTTCCGACAACCATCTTCGCCTTCTTCCTCGCTCGAGGAGCTTGAAGAGCTGTCGCTGCGGTGAAGCTTCTCGAGGAGACTATGC
TTCTTCTCTTCTTCTTCTTCCACGTGTTTAACCTCAGGCGCCGGCTCCGAGACGTGAACCTTTTGCTCAAACTCAGACGCTATGGC
GGTCTCCTCTGGTTTTGTTTCATCTTTCTTCTTCCCCAAGAAATCGAACAGTCCACGATCTGTGACCTCTGTGGCCGCTGCAGATG
ATTCCTCCGACTCTACCTT
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| GenBank top hits (Blast detail) | Score | e value |
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| CAA64428 pollen coat protein [Brassica oleracea] | 407 | 8e-038 |
| ABV89609 pollen coat protein [Brassica rapa] | 407 | 8e-038 |
| ABV56004 dehydrin protein [Capsella bursa-pastoris] | 375 | 4e-034 |
| NP_187697 Cytochrome b-c1 complex, subunit 8 protein [Arabidopsis thaliana] | 358 | 4e-032 |
| XP_002882701 hypothetical protein ARALYDRAFT_897280 [Arabidopsis lyrata subsp. lyrata] | 352 | 2e-031 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P42763 Dehydrin ERD14 | 349 | 2e-032 |
| P46269 Cytochrome b-c1 complex subunit 8 | 335 | 9e-031 |
| Q9XJ56 Phosphoprotein ECPP44 | 230 | 1e-018 |
| P31168 Dehydrin COR47 | 190 | 6e-014 |
| P42759 Dehydrin ERD10 | 172 | 7e-012 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G10860.1 ubiquinol-cytochrome C reductase complex ubiquinone-binding protein, putative / ubiquinol-cytochrome C reductase complex 8.2 kDa protein, putative | 359 | 1e-034 |
| AT5G05370.1 ubiquinol-cytochrome C reductase complex ubiquinone-binding protein, putative / ubiquinol-cytochrome C reductase complex 8.2 kDa protein, putative | 351 | 1e-033 |
| AT1G76180.1 ERD14 (EARLY RESPONSE TO DEHYDRATION 14); calcium ion binding | 349 | 2e-033 |
| AT1G20440.1 COR47 (COLD-REGULATED 47) | 190 | 5e-015 |
| AT1G20450.1 ERD10 (EARLY RESPONSIVE TO DEHYDRATION 10); actin binding | 172 | 7e-013 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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