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Information for unigene UN24851
| FASTA Sequence |
| Unigene ID: UN24851 | Length: 1504 |
SSR | | CAATCTCTTTTCGCTTGTATCTCGATCGGTAATTAGTGTTTAGGGTCTCTCTGCTTCCCGGGGGATTCTGAATCTCCACCGTTTTG
GTTCCATACAGATTCTCTTCTTGTTTTTTTTTTAATTTTTAATTTTCACACAGAATCCTAAAAAAAACCCTAATTTTGATACATTA
GCTGTAGAACCTTCTGGATAGAAGAAGTTTGTGTCTTTTTGATTTGAAAGAAGATGCCTCCAAAGCAACAACCAAAGGCCGATTTG
GCGAAAAAGCAGAAGCAAGTGGAAGACAAAACATTCGGTCTGAAAAACAAGAACAAGAGCAAGAATGTTCAGGAGTATGTCCAGAG
TCTAAAGCAATCTGTTCAGCCTAAACCCGATGCCTCCAAAGTTGCTGCCAAGAAAAAGAAAGAGGAAGAGAAAGCGAGAGAACAGG
AGTTGAATGAGTTGTTCAAGGTTGCCATTAGTCAGCCTAAAGTTCCTGTAGGTGTGGATCCGAAGTCCATCCTGTGTGAGTTTTTC
AAGGCAGGGCAGTGTCAGAAGGGATTCAAGTGTAAATTCTCTCATGACTTGAACATTCAGAGGAAGGGTGAGAAGATCGATATTTA
CAGCGATAAGCGTGATGAAGATGGAGATATGGAGGAATGGGATCAAGAAACCCTTGAAAAGGTTGTAGAATCGAAGAAAAATGAAT
ATAACCAGAACAAACCAACGGATATTGTTTGCAAGTATTTTCTGGATGCGGTGGAAAAGAAACAGTATGGGTGGTTCTGGGCCTGC
CCTAATGGTGGCAAAGAGTGTCATTACAGGCACGCTCTTCCTCCTGGTTATATCCTTAAATCTCAAATGAAGGCTCTCTTGGAAGA
GGAGTCACAAAAGATGCCAGTTGAAGAAGAAATCGAAAATGAGCGTGCAAAACTGAAAACCGCAACACAAATGACGCCTGCGCTAT
TTATGGAATGGAAGAGGAAGAAGATAGCTGAGAGAGATGCAGGTTTGGCTGCTTCTCAAGCTGAGAGAGCTAAGAACGACCGTATG
AGTGGTCGGGAGCTGTTTCTGTCGAATGCAAGCTTGTTTGTGGATGATGCTGAGGCTTTTGAAGAATACGAGAGGGAAAAAGAAGA
GGAAGAGACTGAACAGAAGGCAAAGAACAAAGAAACAGAGGCAGGGACAAGCAAGAGTAGTGGTGATACTGCTGAACAGACTTCAA
AAGAAGTGGATGAAGACGAAGAAGATGATGACGATGACGATGATTTGGACATGGATGAGCTTGATGAACTGGAAGCAAGCTTGTCG
AAGACATCCATCCAGATTCGTGAGCAAGGATCATCATCATCATCTTGAGATGAAAAACATTATGTAAGAGGTGTGGAAGAGGGGAA
AAAGCATGTGTTTACTTTTGATAGATTTGGATTTTACAGACGCACAAAAACCTATTTTGCAGGTGTTTTGAATAAACTTGTTACTG
TCTTAAAGATCTTCAAATAATGTCTCATCAAGGACTGGTACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002883934 zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp. lyrata] | 1774 | 9e-196 |
| NP_179618 zinc finger CCCH domain-containing protein 21 [Arabidopsis thaliana] | 1773 | 1e-195 |
| XP_002525195 zinc finger protein, putative [Ricinus communis] | 1505 | 1e-164 |
| XP_002326328 predicted protein [Populus trichocarpa] | 1464 | 8e-160 |
| XP_002456593 hypothetical protein SORBIDRAFT_03g039020 [Sorghum bicolor] | 1460 | 2e-159 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SK74 Zinc finger CCCH domain-containing protein 21 | 1773 | 5e-197 |
| Q0JHZ2 Zinc finger CCCH domain-containing protein 11 | 1429 | 4e-157 |
| Q54DA5 Zinc finger CCCH domain-containing protein 15 homolog | 801 | 2e-084 |
| Q5H7N8 Zinc finger CCCH domain-containing protein 15 | 672 | 2e-069 |
| Q7JWR9 Zinc finger CCCH domain-containing protein 15 homolog | 664 | 2e-068 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SGS6 Zinc finger protein, putative | 1505 | 9e-165 |
| B9MT73 Predicted protein | 1464 | 5e-160 |
| C5XP17 Putative uncharacterized protein Sb03g039020 | 1460 | 2e-159 |
| B6TD33 Nucleic acid binding protein | 1441 | 2e-157 |
| B9HM02 Predicted protein | 1440 | 3e-157 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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