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Information for unigene UN24969
| FASTA Sequence |
| Unigene ID: UN24969 | Length: 1331 |
SSR | | AACCAAGTATTATGTCTCATTAGAAAACTCTTCACACTCAAGAGTGTAGAGAAAACATTTCACAAGAAAAATACTACGCCACAAAC
TCTAGGAAAAACAAAACCAAACCCTGGTTGCAAAAACCACATACTTAAGATACATCGAATTAATCACGCTCGTCTTAATACATTAA
TCAAAAGAAGAATGAAACCCGATCAGAATTTAAAAACCAAAACAGAAAAAACAAAATAAGAATGAATCTCACAGATATATTGTTTG
TGTGTGTTTTATCGTCTAGGAATGATGACTTGTGCTTCCATCTTCTTGATGGCTGTGATGATGATCTCCGTCGCGGTTTTGCTGGT
TCGCCGTCTCCTGAACCGGCCGGTAAGCCGCGTTTAACGCCCCTAAAACTCCATAATGGTTGTGTTCTCCACCTCCTCCTCCTCCT
CCGTAACCAGAGGCCAAAGGCTGTCCGGAAAACAAAGCAATGGGAGCTGCAAAATTCATGAGATGTACTCCTGCTCCTCCTCCGCC
ACCACCACCACCACCGTTTGTGTTGTAAACGTCAGCGGAATGATGAGGGTTGATATTAAAAGCCCATAGATTCTGCGTATTATCAC
CACTGCTCCAAAACGGCGCCGTCGCAGGAGTCTGACTCGTAGGTAAAGATCCAGCCGTTGATTGTACTAAATAGTTCCCCATTTGG
CTGTGATCTAAAAGCTGCGAAGAAGAAGAAGAAGAATGTGACTCGTTCTTGGGACGCACCTGATGATGATGAGCCATATTAGGTGA
GTGAAAGTAGTAGCTGCTCGGAGTTGTACGAAGATGAGCAGCAGAGAGAGAAGATCTTGAGCTACGAAGTGAGATATTAAGAGAAG
TGAAGTTAGCCGGTATGGTTCCAGTCCCTGTAGCGGCTATAACCGCCGGTTCAGCTTGCTGTAGAAGCCACTCGATGGTTTCGCCG
TCGGATTTATGACCTAGCTCACGTGTGAGCTGAAAGACACGTGCTGCGCACATGGCGGGCATGCGGATCCTACGGCCTCGGCCTTC
TACTTTGGTGTGTCTGTCCTTTGTTGAGGTTCGCTTAGGAGGTGGTTTCTTGGAGAGAGCGTTAGGGTCGGAGTTAGGTTCGGAAG
AAGAAGCTGATGGGATGATGGCTAAGGAAGTGGAAGAGGAGGAAGAAGAATCAAGAAGCTGGAGAGGGAGGTTTGGTCTGTGATGA
TTCTGGTTATGATCCGGATCCATTTGATGATGATGATGATCGAAGATGGGTTGTGGTGGGGAAGTGGGACTACTGTCTCTGTTATA
TCTTTATGTGAGACATAGTTTCTCTCTCTATCTTCTTTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002887250 hypothetical protein ARALYDRAFT_476101 [Arabidopsis lyrata subsp. lyrata] | 1436 | 1e-156 |
| NP_564973 transcription factor TCP15 [Arabidopsis thaliana] | 1378 | 6e-150 |
| BAJ34416 unnamed protein product [Thellungiella halophila] | 1145 | 6e-123 |
| CBI15239 unnamed protein product [Vitis vinifera] | 647 | 4e-065 |
| EEC74006 hypothetical protein OsI_08931 [Oryza sativa Indica Group] | 504 | 1e-048 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9C9L2 Transcription factor TCP15 | 1395 | 3e-153 |
| Q93Z00 Transcription factor TCP14 | 438 | 3e-042 |
| Q9C518 Transcription factor TCP8 | 397 | 1e-037 |
| Q9C7G4 Transcription factor TCP22 | 396 | 2e-037 |
| Q9LQF0 Transcription factor TCP23 | 396 | 2e-037 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B8AIH1 Putative uncharacterized protein | 504 | 9e-049 |
| B5G4Z3 BHLH (Fragment) | 478 | 1e-045 |
| A3ABC3 Putative uncharacterized protein | 469 | 1e-044 |
| Q6YUX6 Os02g0747400 protein | 469 | 1e-044 |
| B9S8T6 Putative uncharacterized protein | 466 | 2e-044 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G69690.1 TCP family transcription factor, putative | 1396 | 2e-154 |
| AT3G47620.1 AtTCP14 (TEOSINTE BRANCHED1, CYCLOIDEA and PCF (TCP) 14); transcription factor | 438 | 2e-043 |
| AT1G58100.1 TCP family transcription factor, putative | 397 | 1e-038 |
| AT1G72010.1 TCP family transcription factor, putative | 396 | 2e-038 |
| AT1G35560.1 TCP family transcription factor, putative | 396 | 2e-038 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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