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Information for unigene UN25010

FASTA Sequence
Unigene ID: UN25010Length: 1373 SSR 
GGGTGAATCTCTTTTATATAATAAACAATTTTTAGAACAAAAACCTTTGTAAAAACATCCCTGAAATCTCTAAAAAACTCACCAGT
CTAAAGACTACAACCATATATAGATAGATAGTAATAACTTAGATTCAAATCACAAGTTCAGCTTCTGAAAAACCTGAATAAATGTG
AGTGAAGAGTTGTAACAAAAGCCCATCATCATCCTCTTCTTGGATGGTTTCTTCAGACACACAGGTTTGGTTCGGTGTCAAAACTC
TAAAACGCCATCCGCCCAGCAAGCCTACTCTCTGAGATTCGTCTGTCTATAGCTTCATTTATCGAGTTCATCTGGCTGGTTTCATC
ATGCATCTTGTATTTCGGTAAGGACATTCTTCTTTCTTCCATAGACATTGCTTCATCATCCCACACAAGATAGACCTCATTAGGCT
GAAAGGTAGGAGGTTTATTTGCAATCCCAGGAGGTGGACCGATTGAAGGACCACTAGTGTCTGGACCAGAAGCATACGAATGAGGA
TTAGTCCCACCACCCACTGGAAAAGAGTTATTAGGCGGATATGCGTTCACTGATCCTCCTACGGGAAGGGGAGCAGAAAAAGGTGA
AGCTTGGGAAGGAGTGATGCTATTCACAACAGGGAACAGAGGTTGAGAAACCGGCATTGCGGGAGATGATGGAGGATTTACTGGAG
TGACTCCATTGACTAGATGAGATGGTGTTGGCACAGTCATCCCCATACCATGAACAGGAAAGAGCTGTTGCGGTTGATACCCTAAA
TGGGTAGGTGGATGAACAGAGACCGCTGGATTATGTGGATACCATTGTTGTGGGCGAGGAGGAGGCATAGGCCACCCAGGACCAGG
AGGACGCATAGGACCAGCAGGATAATACATAGGTCGGACAGCAGCAGGGACTTGTTGAGGTTGATATACCATTCCGTATGGTCTAG
GAACTGCAGCACCAAGAGGGGCGGAAGGAATCTCAACTTTTGCAACTTTGGCTGCCGACTCTTCCTCTTCTTCTCCGTAGTGAGCA
GCCAAGACATCAGGTGGAATTCCTTGCATTCCGTATACTTCAATATCGGTTGAATCTCGACCGTCTTTAGCATTAGGAACCTTTGT
GACGTTCTCTTTATGAACTTGAAGGACATGAATGACCATGCCGCTAGCAGTGGAGAGCTTCTTGTGGCAGGCATGGCACTTGAAGT
GTTTGGCTTTCTGGTGCTGCACTAGAATCTTCTCGTCCTCGAACTCTCTGTCGCAGTAATAGCACCACACCTTCTCCGCCGTTCTC
TTCTTCTTCTTCCCCATCACGATTGATCGGTTCTAGTTTCTCTTCTTCTTCTTCTGCTCGCTAGGGTTTCTCTGTTCGCACAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002893670 hypothetical protein ARALYDRAFT_473343 [Arabidopsis lyrata subsp. lyrata]15382e-168
BAJ34202 unnamed protein product [Thellungiella halophila]11555e-124
XP_002274291 PREDICTED: hypothetical protein [Vitis vinifera]10856e-116
AAM62833 putative zinc finger protein [Arabidopsis thaliana]9711e-102
NP_564369 C2H2-type zinc finger protein [Arabidopsis thaliana]9701e-102

Swiss-Prot top hits (Blast detail)Scoree value
O43670 Zinc finger protein 2073712e-034
Q5R8K4 Zinc finger protein 2073381e-030
Q6DDW4 Cleavage and polyadenylation specificity factor subunit 61264e-006
Q16630 Cleavage and polyadenylation specificity factor subunit 61247e-006
Q6NVF9 Cleavage and polyadenylation specificity factor subunit 61247e-006

TrEMBL top hits (Blast detail)Scoree value
Q8LE54 Putative zinc finger protein9717e-103
Q9C5G0 Putative zinc finger protein9709e-103
Q9FYI5 F17F8.149682e-102
Q94BZ2 At1g30970/F17F8_149592e-101
B8BEN3 Putative uncharacterized protein9233e-097

Arabidopsis top hits (Blast detail)Scoree value
AT1G30970.1 SUF4 (suppressor of FRIGIDA4); DNA binding / protein heterodimerization/ protein homodimerization/ transcription factor15101e-167
AT1G30970.2 SUF4 (suppressor of FRIGIDA4); DNA binding / protein heterodimerization/ protein homodimerization/ transcription factor11677e-128

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  33%
 
121  33%
 
211  33%

Unigene MembersMember information