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Information for unigene UN25012
| FASTA Sequence |
| Unigene ID: UN25012 | Length: 1556 |
SSR | | GACTTAATGGAAGATAACCAAAGCTACTTTGTATAGTTTACAGCTCCATATTGACCATTGGATAGATTCAAAATAATAATGCAACC
TAAGGAAGATATATAATAATTCTTTAAGTTTTGCTCACTCGTCACTGGAGTATACATCATAGACATAAAGCTTAATCTATAAAGCC
AAGTCCTCACTTCTCTAACGCACTTATCAGTGCCTTCATCTTCAGGCAAAGTTTCACTTGAACAAAGTCTCCTCTTCAGAACCATT
CAATTAACAAAAGAAGGAGATTTGTCCAATCCAGGACACTAACACGAAACAGCTTCTGCTGCATCTGGCTTAGACTCTTGACCATC
CGTCTCAGCGAGTAAAGGGCTTTTCTGGAACTTATTCCTCAGCTGACCACAAGCAGCATTCGCTTCAAGCCCTCTTGTTTGCCTCA
CGCTTGCTGTTATCTTACGCGACTCCAATGCAGCCGCAAAGACCAGTACCGCTTTCTTGTAAGGTCGCTTGTACTCAGATCCTTCT
ATAGGGTTGTAAGGTATCAAGTTAACGTGATAAGTTTTGCCCCATTCACGTAGTAGCTCTGCGAGTTCCAACGCGTTCTCAACTGA
ATCATTGACTCCAGCTAGAAGAGCATACTCGAAGGAGACTCGTCTATTTGTTTCTTGAAAGTAATCTCGACAATCTTGCATAATTG
CTTCCAGCGGATAAGCCTTGGCACTTGGTACAATTTTCTCCCGGAGAGACTGGTTTGGAGCATGTAAGCTGACAGCTAAAGTGGAC
TGAAGCTTATGAGAGGCAAGCTTCTTGATTGTGTTCGGAACACCAACTGTTGATATTGTAATCATTCTTTGCCCGATTTCAATGTC
CTTGTTTAAACAACGATGAGCATCAAGTACTGACTTTAGGTTCAACATGGGTTCACCCATTCCCATGAAGACCACGCTTGTCACTC
TGTGCTTGAACACATCCTCTATAGCCAACACCTGCTCAATGATTTCATGTCTCTGAAGATTTCTTGAAAACCCTCCTTTCCCCGTA
GCACAAAACGAGCAACGCAGTGGACATCCAACCTGGGAAGAGACGCAAGCAGTGAGACGCGTTATGCCCTTCTCTTCCTGGACCGG
TATACCAACAGTTTCGATCAACAGGTTATCTTCAAGCTTCAACAGCAGCTTAATAGTACCATCAGTGGCAGTGACAGTTTGGTAAA
TGGGTGATCTTCCCACCTTATACCCACTTTCCACAAGCTCCTTTCGAAACGTCTGCGGCAAGTTGCTAAAGTCTTCGACTTGTTTA
GCCTTCCTCTTGTAGATGAGATGATGGAGCTGCTTCCCTCTGTACCCTTCTTGACCGAGTTTGATAGCGAGCTGTTGAAGCTCCGG
CTCCGACATTCCTAGGAGGACCTGAGAGTCTACGTGCGGGGCACGCACCGGTTTCGGAGGTTGTACGGCGGTTGTGGCGGTTGCGG
CGGCGGCGGCGGTTGTGGAGAGGGAGTAACGTCGCACGACCATGCGAGATATGGGGACAGAGAAGACGAGGTTATGAAGCATAGCA
ATCGTATC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_565909 radical SAM domain-containing protein [Arabidopsis thaliana] | 1872 | 4e-207 |
| XP_002879809 radical SAM domain-containing protein [Arabidopsis lyrata subsp. lyrata] | 1854 | 5e-205 |
| NP_850319 radical SAM domain-containing protein [Arabidopsis thaliana] | 1840 | 2e-203 |
| XP_002533149 catalytic, putative [Ricinus communis] | 1596 | 4e-175 |
| XP_002283725 PREDICTED: hypothetical protein [Vitis vinifera] | 1518 | 4e-166 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| B2J6D0 Ribosomal RNA large subunit methyltransferase N | 924 | 1e-098 |
| Q2JMN2 Ribosomal RNA large subunit methyltransferase N | 924 | 1e-098 |
| B7K4N4 Ribosomal RNA large subunit methyltransferase N | 922 | 2e-098 |
| B0C9F4 Ribosomal RNA large subunit methyltransferase N | 921 | 3e-098 |
| Q2JRQ8 Ribosomal RNA large subunit methyltransferase N | 920 | 4e-098 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O48815 At2g39670/F17A14.4 | 1872 | 3e-207 |
| Q3EBJ6 Putative uncharacterized protein At2g39670.2 | 1840 | 1e-203 |
| B9T4I0 Catalytic, putative | 1596 | 3e-175 |
| B8A9X8 Putative uncharacterized protein | 1428 | 8e-156 |
| Q5JM88 Os01g0973400 protein | 1423 | 3e-155 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G39670.1 radical SAM domain-containing protein | 1893 | 5e-212 |
| AT2G39670.2 radical SAM domain-containing protein | 1870 | 2e-209 |
| AT1G60230.1 radical SAM domain-containing protein | 468 | 9e-047 |
| AT3G19630.1 radical SAM domain-containing protein | 430 | 2e-042 |
| AT1G50050.1 pathogenesis-related protein, putative | 172 | 2e-012 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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