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Information for unigene UN25017
| FASTA Sequence |
| Unigene ID: UN25017 | Length: 1479 |
| SNP | AAACCATAAAAATAGTTTATACACTATAAATCTGGAATAAAAACTCTAACAAAAGCACACATGATAATGAACCATGTATTTACATA
AGCTTTAATTTGTTATTAACTTTCAAGTTTCAATACAAATATATATAAATCTTGAACAAATTCTTAGAAGATCAAGAGATCTTCCT
TCACATTGTAACCCATCTTCTCGAGATTAGGCTGCAACGCAAACTGAATCATAGGCGGTGGTCCACACGCCAAGGCCAGAGAGTCA
CCTTCTAAACCGTCAGGGACATGTTCTCTAAGCACAGCTTCGGTGATAAACCCTGTGCTGTACTCCCAACCTTCTTTTGCAATTTC
AACAACGTACCAAATCTTTAGCCTGTCCTCAAACTTACTAGCCCATCCTTCTAGCTCTTCTCTCACAAGAATATCATCCTCGGTTC
GGTTTGCATAAACCACAAACATCTCGGTTTCGTCCTCCGGGTCACTTAGTATCGATTGAATGATTTGGTAGATTGGAGTTATACCG
GTTCCTCCAGCAAGCATGGCTAGTTTCTTGGCAAACTTTGGTTTACCGTTGACCATGAAGTTGCCTTTGCCTTTGTACTCAATATG
TCCTAACGGACCTTTGATGTCTAGGACCGCACCTATCGGTAACGAGTCTAGGTGCTGCGACATGAGCCCTCCGTTGGGGAATCTCG
GATGGACGTTCTTGAAGTAAACCTTGATGACTAGGTCGATATATCCAACCGCGTCGACCGCGCTGGTCGGAGTATAGGCTCTAAGA
CAGAGCTTGTCGTTTATGGTGGCGCAGAGGAAGATGTGCTTCCCGACGGGTAGACCAAGCTGCTGATCTTCAGATGGTAACGCGAA
TCTGAATCTACGCACGTCGTGAGAGATCGAAGTCTTCTCGATGAGTTTGACCGGGACTTTCTCCCGTGGGTTGACCAAGGCTATGT
TCTTAGCAGGAGCTAGCTCTCTGATTGGAGCTAACAGAGACATTACACTCGAGCCACCATGGACCGAGACGTTCGGTGAAGAGTCG
TACCCCGTTGTGATAAGCTCACCGATACGATAATCTTCAAGAAGCTTCTTGGCTTTGTCTGAATGAATAGCTTCAAACTCTTCGGT
GCAATCAGTGCCAGCGTTGATGAGGATAGAGTCCGAGCCACCAGGGTGGTCTTTCAAGAAACGCGTGCAGTCGTAGATGTGACCGT
GGACTATGATCCATGCAGATTCGGCTGAGTTGTGTTTTCTGACTTCGGACATTGAGAACATCTTTGAGGCAGTGTTCATGAAAGGT
GTTGAAACTGATTTTTTCAAAGTAGGGTTTGACTCGGAGGATTTCTCGATCTGACGTTCCTTTGCCATCCACCCACCCGACTGGTT
TCCGGGTCGGGTTGGGTGTTCGAAGACAATCCCTATCTCTCCTCTGTGAGGCTTGCACACGTTGGTTTTGATCCTGAACCAGCAGT
TGTTCATCATCCCCATC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ACF93242 nitrate reductase [Brassica rapa subsp. chinensis] | 2260 | 4e-252 |
| P39867 RecName: Full=Nitrate reductase [NADH], clone PBNBR1405; Short=NR | 2259 | 5e-252 |
| P39868 RecName: Full=Nitrate reductase [NADH], clone PBNBR1412; Short=NR | 2189 | 6e-244 |
| XP_002889158 hypothetical protein ARALYDRAFT_895665 [Arabidopsis lyrata subsp. lyrata] | 2177 | 2e-242 |
| CAA79494 nitrate reductase [Arabidopsis thaliana] | 2172 | 6e-242 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P39867 Nitrate reductase [NADH], clone PBNBR1405 | 2259 | 2e-253 |
| P39868 Nitrate reductase [NADH], clone PBNBR1412 | 2189 | 3e-245 |
| P11832 Nitrate reductase [NADH] 1 | 2172 | 3e-243 |
| P11035 Nitrate reductase [NADH] 2 | 1989 | 4e-222 |
| P08509 Nitrate reductase [NADH] 2 | 1867 | 6e-208 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B7ST74 Nitrate reductase | 2260 | 3e-252 |
| B9DHJ3 AT1G77760 protein (Fragment) | 2172 | 4e-242 |
| Q0WLH2 Nitrate reductase | 1973 | 5e-219 |
| Q0WUE2 Nitrate reductase | 1973 | 5e-219 |
| Q94C76 Putative nitrate reductase | 1967 | 2e-218 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G77760.1 NIA1 (NITRATE REDUCTASE 1); nitrate reductase | 2173 | 2e-244 |
| AT1G37130.1 NIA2 (NITRATE REDUCTASE 2); nitrate reductase (NADH)/ nitrate reductase | 1990 | 3e-223 |
| AT5G17770.1 ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1); cytochrome-b5 reductase | 284 | 2e-025 |
| AT2G32720.1 CB5-B (CYTOCHROME B5 ISOFORM B); heme binding | 219 | 6e-018 |
| AT5G48810.1 CB5-D (CYTOCHROME B5 ISOFORM D); heme binding | 213 | 3e-017 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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