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Information for unigene UN25038

FASTA Sequence
Unigene ID: UN25038Length: 1260 SSRSNP
GGAGTGCTCCACTCAATCTTCTTCTTTCACCAAAACAACAGCTGCTAGGGAGAGAGAGAGAGAGAGCCAAACTCTATCCCTCAAGC
TCTCAAGAGAATCAAACTCCAAAGATGAGCAGTTTCTACGAGCATTACGAGTTCCCATACGATTCCAACCAGGTTCATCATCTCTA
CGATCATAACTTTTATGATAACAATCAACATCAGCAGTTTGGTTTTGATCCAATGAGTTATAATAATAGTTATAATAACTGGAATG
GATCTGAGTACGAGTATGAGTATGAGACAGCCTCTCCATCTGTTGCTTACTCTGTCTCCACCTTGTCTGAGCCGAAGCACTTGTTC
TATGATCCGAGTTACTACACAACAACAACAACCTACGAGTCTCCTCCTCAGTTCAGTATCTACTGCAATGTTCAAGGCTTCAACGA
GCCGGAGTTCGAAGAGTACGATCCCACGCCGTACGGCGGTGGCTATGATATCGTTGCGACATACGGGAAACCTCTTCCTCCGTCGA
TGAAAACTTGTTACCCTTCTTCAACCGCTGATCAAGGTAAACCTCCTTCTCCTCCGGAGATCATCGCTCCTGTTCCTCTTGGAATC
TATGGTGGTGGTGAAGAAAAGAAAGCTGTCAAGAAACATGTGACTTTCTCTGAGCCGTTAGAGGAAGCTAAACCGTTAGAAACCAT
TAAAGAAGAAGAAGAACATGATCATCAAGAAGAGGCAGAGGAAGAGGATGAAGAGGAAGAGGAAGATCCCAGTTCAAACAATGAAA
CTGTAGACGAAGTTGAAGTGAAAGCTCTGTATGTTCCGTCTGGTTACGGCTTAGAAGCGACGGATCTCTGTGAGGTTATATTCGGA
GGCTATTTTCCTTGTATCTTACGTAACAAAAGACGCCAGGAGGATGAGAATCGTGCGGCTGAAGTTACTTGCTGGGAGAGCACAGA
TTCTGATCCGTGGAAGACGACTTCAGACTACCTTTTCGGGGATTCGTATCCGTATGGTTATGAGGATGGTGTTGGAAGAAGACAGT
TTGAGATCTCCTCTTATGGTTATCTGAGGTGTTAACTGGAATTGTCACGATCATCAGATGTGTCAAAGTTATGTGGTGAGAGCAAT
ATTTTTTTTTATTATTGATGAAGCTGATTCGTTTTAGTATATACAATGATGATCTTTCTTGTATGGTTGGTCCAACGTTCTTATGA
AAAGATATTCCAGGTTGATCGATCAATATAAATGTTACAAAAACTTCCTTCTTAAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002889868 hypothetical protein ARALYDRAFT_471281 [Arabidopsis lyrata subsp. lyrata]6796e-069
NP_172611 uncharacterized protein [Arabidopsis thaliana]6545e-066
XP_002518589 conserved hypothetical protein [Ricinus communis]3884e-035
XP_002316699 predicted protein [Populus trichocarpa]2916e-024
CAN76854 hypothetical protein VITISV_006002 [Vitis vinifera]2461e-018

Swiss-Prot top hits (Blast detail)Scoree value
Q9FKA5 Uncharacterized protein At5g395701498e-009

TrEMBL top hits (Blast detail)Scoree value
Q9LPZ0 At1g114406543e-066
B9RXX0 Putative uncharacterized protein3882e-035
B9HYT2 Predicted protein2914e-024
A5BG40 Putative uncharacterized protein2467e-019
B9H1W5 Predicted protein2323e-017

Arabidopsis top hits (Blast detail)Scoree value
AT1G11440.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT3G29075.1); Has 22740 Blast hits to 8622 proteins in 417 species: Archae - 22; Bacteria - 573; Metazoa - 11353; Fungi - 2147; Plants - 905; Viruses - 631; Other Eukaryotes - 7109 (source: NCBI BLink).6542e-068
AT3G29075.1 glycine-rich protein1424e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
64  33%
 
94  33%
 
114  33%

Unigene MembersMember information