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Information for unigene UN25060
| FASTA Sequence |
| Unigene ID: UN25060 | Length: 943 |
SSR | | GAGAGAAAATAAAATCTCATATCATGGCTTCGCTTCCTGTCCACTTCTCCAGGAATCATCTCTCTTCGCCCAATTTCTCCGACAGA
TTCCGCCGTTCCGCGGAGCGGAGATCTTTCGTAGCTCTTGTACACTGCTCTGCTAGAGAAAATGATCAAGGAATCAAGAAGACTTT
GTTTCCTGTGAAGGAGCTTGGATGTTTAGCTTGCGCCGCTCTTTCTGCTTTCACTCTCACAATGGCCTCTCCTGTCATTGCTGCTA
ACCAGAGACTTCCTCCGCTTTCAACAGATCCAGCTCGGTGTGAACAAGCTTTTGTTGGTAACACGATAGGTCAAGCAAACGGGGTC
TATGACAAGCCACTCGATCTCAGGTTCTGCGACTACACCAACGATCAGTCTAATCTCAAAGGCAAGACTCTCTCTGCTGCCTTGAT
GTCAGGTGCCAAGTTCGATGGTGCTGACATGTCTGAAGTCGTTATGTCTAAAGCTTACGCCGTTGGAGCTAGCTTCAAGGGAGTGA
ATTTCTCGAATGCCGTTATCGATCGGGTGAACTTCGGGAAGTCGGATCTAAAAGGAGCTGTGTTCAAGAACACGGTGTTGTCAGGT
TCCACATTCGAGGAGGCAAACCTGGAGGATGTGGTCTTTGAGGACACCATCATTGGTTACATAGACCTTCAGAAGATATGCAGGAA
CGTGACAATAAACGAAGAAGGAAGACTCGTCTTGGGTTGCAGATAAAGAGATGAAGAGACTAAAGGGTTTTGGATTTGGTGTGTGT
GTGTGTGTAAGAATTTGAGAGTTGACACAAAAGAATGTATGAACAAATAAGCGTACGTTTAAGTGTTGAAGGATATTAGGACTCAG
AAGAGTGTTATGAGGTTTGTATAATCAAATTCCTGTAAAGTTTGTAATCAGACAAAAGGGTTTTTCTCTGTTATTCGTTAATT
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_851183 thylakoid lumenal protein [Arabidopsis thaliana] | 987 | 8e-105 |
| NP_200161 thylakoid lumenal protein [Arabidopsis thaliana] | 979 | 7e-104 |
| XP_002865974 thylakoid lumenal 17.4 kDa protein, chloroplast [Arabidopsis lyrata subsp. lyrata] | 979 | 7e-104 |
| NP_001190531 thylakoid lumenal protein [Arabidopsis thaliana] | 904 | 3e-095 |
| XP_002318440 predicted protein [Populus trichocarpa] | 788 | 9e-082 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
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| P81760 Thylakoid lumenal 17.4 kDa protein, chloroplastic | 987 | 3e-106 |
| P73709 Uncharacterized protein slr1819 | 122 | 7e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| B9I1Y5 Predicted protein | 788 | 6e-082 |
| B9SJT2 Thylakoid lumenal 17.4 kDa protein, chloroplast, putative | 777 | 1e-080 |
| B7FHD5 Putative uncharacterized protein | 759 | 1e-078 |
| B4FHA0 Putative uncharacterized protein | 729 | 4e-075 |
| A2Z925 Putative uncharacterized protein | 726 | 1e-074 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G53490.1 thylakoid lumenal 17.4 kDa protein, chloroplast | 988 | 2e-107 |
| AT5G53490.2 thylakoid lumenal 17.4 kDa protein, chloroplast | 985 | 5e-107 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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