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Information for unigene UN25072
| FASTA Sequence |
| Unigene ID: UN25072 | Length: 1023 |
| SNP | GGGTTCAAACAGAGGTTCTAGTTGTTTCATCTAACCTGTTATGCTGTCTATGGACTCTTCTTCTTTTCACGGCTTATGCTTACGGG
AGTACAAGGGCAAGAAATGAAGTAAAGAGGGAGAGTGTCAAAACGAACAAATAGGTCATACGAGTACGACGTAAGTGGAGTGGTAA
AGCGTGACATGAGCCCTCTAAAAAAGCGTGACATGAATTATAAATTGGATCACAACGTTTAAAACGTATTTCTAACAATCTATTCT
TCTCACCATATCCTCTGCTTCTCCCAAAGAAAACAAACAATATAAAAGGAGAATATAAAAAAATGAAATTTCTGCTTTACCTAGTT
ACGTGCTTTCTCCTCTTACACGTTTTCGCAACAGCAAAATCTCTCATTCAAGATTCTTGCAAGAAAGCTGCAGCGAAAAACCGAAA
AGTACTCAAACTCGATTTCTGCCTCAAGTCTCTCGAAGGGTGTCGGCAGTGCCAAACCGCAAAAAATCTCAGCGAGCTAGTCTTCG
CGTCGATGAAGAACGCTAGGACGAAAACGAAGAGAGTGCACGCACAGATGAAGAAGGATTTTGACGCGAAGAAGTATCCCAAGGAC
AATGACATGCTGGTAATGGAGTGTCTCAGCGATTATTCAAGCACTGTTCAGATATTGGGCTTGGCTATGGAGACCTTTAAAGATCG
TGATTACAATGACCTTATCAGTCGTATGACTCTTGGGATGGAGAGCATGGATGCTTGCGATGAAGGATACAAAGAAAGATCAACGC
CTCAGATATCTCCGTTTATAAAAAGCAACGAGTTTTTAACTAATTTGATTCAGATTCCTGTAGCTTTTACAAAGATGTTGAAAAGA
GAATAATTAATTAAGACATGGATTAAAGATTATCCTATGTGGTATGGTAAGTTAAGAGTAACTGGGTTGCTCAATAATGTACGTAG
CCTCTAGGCCTTCTTTAACTGGATCTTTTATGGAAATTGAATACCAATGCTGATTATGTAACATCCCGAGTTGTGAT
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002863382 invertase/pectin methylesterase inhibitor family protein [Arabidopsis lyrata subsp. lyrata] | 360 | 5e-032 |
| NP_199504 plant invertase/pectin methylesterase inhibitor domain-containing protein [Arabidopsis thaliana] | 351 | 5e-031 |
| XP_002863379 invertase/pectin methylesterase inhibitor family protein [Arabidopsis lyrata subsp. lyrata] | 329 | 2e-028 |
| XP_002863381 hypothetical protein ARALYDRAFT_494284 [Arabidopsis lyrata subsp. lyrata] | 324 | 7e-028 |
| AAM61200 unknown [Arabidopsis thaliana] | 302 | 2e-025 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FJR8 Genomic DNA, chromosome 5, P1 clone:MQD22 | 351 | 3e-031 |
| Q8LFU4 Putative uncharacterized protein | 302 | 2e-025 |
| Q9FJR7 Similarity to invertase inhibitor | 295 | 1e-024 |
| Q9FJR4 Genomic DNA, chromosome 5, P1 clone:MQD22 | 269 | 1e-021 |
| Q8LD86 Putative uncharacterized protein | 233 | 2e-017 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G46930.1 invertase/pectin methylesterase inhibitor family protein | 351 | 2e-033 |
| AT5G46940.1 invertase/pectin methylesterase inhibitor family protein | 300 | 2e-027 |
| AT5G46970.1 invertase/pectin methylesterase inhibitor family protein | 269 | 6e-024 |
| AT5G46950.1 invertase/pectin methylesterase inhibitor family protein | 238 | 2e-020 |
| AT5G46960.1 invertase/pectin methylesterase inhibitor family protein | 237 | 3e-020 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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