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Information for unigene UN25089
| FASTA Sequence |
| Unigene ID: UN25089 | Length: 1122 |
SSR | | GGGATCCATCATCAACAATCACTAGCAGCAGCAGCAGCCATAACCTAAACAAACACCTTTCCCCTCCTTATCTCTCTCTCTCCCTG
ATGGCCTCCAAGGCACTCTCTTCTTTCAGCGCTAAGCCCGGTGTGTCGCTACTCCCCCATGGCGTCACCTCCTCTGCTGCCTCTCG
GTCTGTTATGTCTATCGGCTTCTCGAGGCATAATAGTGGGGGCAGGGGAGTGGTGGTTGCGTCCTCGACGGTAGATACAAACAATA
TGCCGATGACGGGAGTGGTGTTCCAGCCGTTCGAGGAGGTGAAGAAAGCGGATCTGGCCATTCCAATCACATCTCACGCCTCCCTC
GCTCGCCAGAGGTATGCCGACGCTAGCGAGGCTGCCATTAACGAGCAAATCAATGTGGAATACAACGTGTCGTATGTGTACCATTC
AATGTACGCCTACTTCGACAGAGACAACGTTGCTCTCAAGGGTCTTGCCAAATTTTTCAAGGAATCAAGTGATGAAGAAAGAGAGC
ACGCAGAGAAGTTTATGGAGTACCAGAACAAAAGAGGAGGAAGAGTGAAACTCCACCCGATCGTCTCCCCTGTCTCTGATTTCGAA
CATGCTGAAAAAGGAGATGCTTTATATGCAATGGAGTTGGCCCTTTCTCTGGAGAAACTTACCAACGAGAAGCTTCTAAACCTTCA
CAGAGTGGCATCAGAGAACAATGATCCCCAGTTAGCTGATTTCGTTGAGAGTGAGTTTCTTGGAGAGCAGATTGAAGCAATCAAGA
AGATCTCAGACTTCATCACCCAGCTAAGGATGGTTGGCAAAGGACACGGAGTGTGGCACTTCGACCAGATGCTTCTGAACTAGACT
GGGACCTCACTTTATGCTCTGTGGGAGATTATTAAAAGAGAATGAAACCGAAGAAGATTCTGTAAAAGTTTCTAGAGTGGAAGTTA
TTATTTGGAGCAAAAATAAGATTGTAGTAGTAATAGTAGTAAGCTTTTGTGTGTTAAGATGATGGTTTTTGTAATAATTTCTTGAG
TTCAATCTATGGTGGTGTTTTTTTGTGTGTTTCATATCATGTTCTGACTATAAAATATATATGAACAAACGGAGACTTGAGGCTCT
GATT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ACM47495 ferritin [Brassica juncea] | 1204 | 7e-130 |
| Q96540 RecName: Full=Ferritin-1, chloroplastic; Flags: Precursor | 1198 | 4e-129 |
| XP_002870910 ATFER1 [Arabidopsis lyrata subsp. lyrata] | 1122 | 2e-120 |
| NP_195780 ferritin heavy chain [Arabidopsis thaliana] | 1109 | 7e-119 |
| AAM61077 ferritin 1 precursor [Arabidopsis thaliana] | 1097 | 2e-117 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q96540 Ferritin-1, chloroplastic | 1198 | 2e-130 |
| Q39101 Ferritin-1, chloroplastic | 1109 | 3e-120 |
| Q948P6 Ferritin-3, chloroplastic | 869 | 2e-092 |
| Q948P5 Ferritin-4, chloroplastic | 844 | 2e-089 |
| P19976 Ferritin-1, chloroplastic | 837 | 1e-088 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G01600.1 ATFER1; ferric iron binding / iron ion binding | 1110 | 2e-121 |
| AT2G40300.1 ATFER4 (ferritin 4); binding / ferric iron binding / oxidoreductase/ transition metal ion binding | 802 | 1e-085 |
| AT3G11050.1 ATFER2 (ferritin 2); binding / ferric iron binding / oxidoreductase/ transition metal ion binding | 801 | 1e-085 |
| AT3G56090.1 ATFER3 (ferritin 3); binding / ferric iron binding / oxidoreductase/ transition metal ion binding | 777 | 9e-083 |
| AT3G61010.1 glycosyl hydrolase family protein 85 | 190 | 1e-014 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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