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Information for unigene UN25106

FASTA Sequence
Unigene ID: UN25106Length: 921  SNP
CTAAAAAAATGGTTCACTATCATCAGCAACCAACCATAAATCCATAATCAATAATCATCTGATCTAACACATCACCCACCTTGAGC
TACTGAGTTTCTTAAATAGATATATCTCTTTTGTGGATTTAAAAAAAATCGCATTATTAGTAAACCTAGAAGCTCATCTTTCTATA
ATGGGTAATAGCTTGGGAAGCAAGAAATCTGCTAAAATCATGAAGATCAATGGCGAGAGTTTCAAGCTGAAGACTCCTGTGAGAGC
TGATACGGTTGTTAAAGACTTTCCCGGCCACGTTCTCTTGGAATCTGAATCCGTGAAGCATTTTGGAATCAGAGCAAAGCCTTTGG
GTCCTAACCAGAACTTGGAATCCAAAAGGCTTTATTTCATGGTGGAGCTTCCTAGAACATGGAAGGAGAGGGCCCCGAGAAGGGTT
CGGTCTGGAATCCAAATGAGTGCTAAGGAGAGGCTAGAGAATCTGAAGCTGTCTCGTAGATCATCTTCTGATCTCTCGGTAATGAA
GAAGGAGGTTGATGAAGAAGAGAGAGAAGTGATGACTAGTGTCAAGTTGAGGTTACCAAAGTGGAAAGTGGAGAAACTGAGGAAAG
AGAGTGAGAGTGGCTCTGATTTCTCCGACAAGATCACAGCTCTCTGTCTCCTCAACATTCAGAGACAACGTTTGCTTCATAATGGA
GGAAGAAGCTTTGGGATTGGAGATGAAGAAGGTGTTGTCAAAGCACAAGAGGTGATCAATTCTTTTTAGGGTTTTGTTTCTTTCTT
TCTTGTTAGAAGAAGAAACACCGATCCGTTTCTCAAGCCACGTTTCTTGCATCCTCTAATTACTAAAATTGCCACTAGGAAACGGA
TGTGCTCCAACTTGTGTGTAACAAACTTCTAGTATTTTCTTAATATAAACAATGCATCCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_683488 uncharacterized protein [Arabidopsis thaliana]7431e-076
XP_002888813 hypothetical protein ARALYDRAFT_894932 [Arabidopsis lyrata subsp. lyrata]7045e-072
XP_002311497 predicted protein [Populus trichocarpa]5291e-051
XP_002315887 predicted protein [Populus trichocarpa]5244e-051
XP_002526007 conserved hypothetical protein [Ricinus communis]4912e-047

Swiss-Prot top hits (Blast detail)Scoree value
Q6NLC8 Uncharacterized protein At1g664802517e-021

TrEMBL top hits (Blast detail)Scoree value
Q9SSJ7 At1g710157431e-076
B9HJA1 Predicted protein5297e-052
B9HW76 Predicted protein5243e-051
B9SJ38 Putative uncharacterized protein4912e-047
Q52K81 At2g013404671e-044

Arabidopsis top hits (Blast detail)Scoree value
AT1G71015.1 unknown protein7436e-079
AT2G01340.1 unknown protein4676e-047
AT5G37840.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: PMI2 (plastid movement impaired 2) (TAIR:AT1G66480.1); Has 49 Blast hits to 49 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).3215e-030
AT1G66480.1 PMI2 (plastid movement impaired 2)2517e-022

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
104  40%
 
61  10%
 
92  20%
 
122  20%
 
111  10%

Unigene MembersMember information