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Information for unigene UN25114
| FASTA Sequence |
| Unigene ID: UN25114 | Length: 1136 |
| SNP | AATTATAAGACGATAATAACTTCTTAAAAGGAAAAAAGAAGTAAATCCTCAGATAACCCAATTCAAATGTGAAAACAAAAACTGAG
TGTTTTAGTCTTGAAAATAGAATAAAAGAGGCTTTAAGCTCAAAACAGTAAAAAGCTACAAGAGACAACATCATGAGACGAAAAGA
GTTGCACTGATTTACTCTTCGTCCTCCTCATCATCGTCCTCACCACCAGCTGCTCCATTCAATGCCTTAACTCTCTCAATCAACTT
GTTCTTCCTTTCTTCATAGGTCAACTTCTTCAAATTGTACCTCTTGTGTGCCTTGGGAGCAGGTTTCTCAGTCTTCTTTGGGTTAG
GATCAGCGCGGATGGCTGCATGAACCTTCTTGTACAACTCCTCCATGCTCTCGGCATCAACTCCTTTCTTCAAGTACTGGCTGAAA
TGAGTCTGAAACTTCTCTGGCTCATCTTCGTTCAACATCTTCATATAGTTCGACACATGGCCACCGTAGATGTAGTTCCTGTGGAT
CTCAGCATCAAGCTGTTTGTTTTCTTTGTTGAAACCGGCGAATCTCTTGTCACTGTGAGGGATATCAAGACCTCCGTCCAATGCAC
CCTTGAGTGCACCGAAGACACGGTTTCCTGTTGTGGTCCTGATAAGACCGACGTCAAGAAGAGCACGGAAAGGTCTCCTTGACTCG
GTGGGTTCCACGGAAAAGTCTTCTCCAGTGGCCTCCACGTTGCCTTCATACTCTTCATCCATTTCCAACATCTTCAACACACGGCG
AGCCAAGAGAAGGCCAGTACAGTAAGCTGCAGCATAGTTGGAGAGCCCAACAGTGAGCCCATATTGAGGAAGCTCATGAGCATAAG
CAGAGGCCTTGACAATGTCACCAGCTATGCTCGCGGACACGATTTGCGCGACGATGTCTTTGTTGGTGAAACGGACAACGAAACGG
TACTTGGGGGTGTTGTACTTGTTCTTGTCTTGGTTGATGAGACGGATTCTTGCTCTGTAATCAGTCTTTCCAGCTCTCCTTCTCCT
GAACTTGACTTGGTACCTCTTGAAGTAAGCATTCGACTTGGATGGCTTCACAAACACCATTGTTTAGCTATGTGAGATATGAGTGA
CGAGGAGGCAAGAGGCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002870764 hypothetical protein ARALYDRAFT_916328 [Arabidopsis lyrata subsp. lyrata] | 1487 | 1e-162 |
| NP_566767 60S ribosomal protein L5-1 [Arabidopsis thaliana] | 1464 | 5e-160 |
| NP_198790 60S ribosomal protein L5-2 [Arabidopsis thaliana] | 1451 | 2e-158 |
| AAM64753 ribosomal protein, putative [Arabidopsis thaliana] | 1445 | 8e-158 |
| CBI24704 unnamed protein product [Vitis vinifera] | 1322 | 2e-143 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8LBI1 60S ribosomal protein L5-1 | 1464 | 2e-161 |
| P49227 60S ribosomal protein L5-2 | 1451 | 7e-160 |
| Q6UNT2 60S ribosomal protein L5 | 1288 | 6e-141 |
| A2WXX3 60S ribosomal protein L5-1 | 1252 | 9e-137 |
| Q0JGY1 60S ribosomal protein L5-1 | 1248 | 2e-136 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B7FJX5 Putative uncharacterized protein | 1321 | 1e-143 |
| A9PFA8 Predicted protein | 1318 | 3e-143 |
| B9SFU0 Ribosomal protein L5, putative | 1311 | 2e-142 |
| C6TL04 Putative uncharacterized protein | 1297 | 8e-141 |
| B9IAZ4 Predicted protein | 1292 | 3e-140 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G25520.1 ATL5 (A. THALIANA RIBOSOMAL PROTEIN L5); 5S rRNA binding / structural constituent of ribosome | 1470 | 4e-163 |
| AT5G39740.1 60S ribosomal protein L5 (RPL5B) | 1457 | 1e-161 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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