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Information for unigene UN25120
| FASTA Sequence |
| Unigene ID: UN25120 | Length: 1141 |
SSR | | GGAGAGATCGAGAGAGAGAGAAGAAGAAGAACAGAACTTTGATCTTGTGAGAGAAAATGGCTGCTTCAGTGATGCTTTCATCAGTG
ACATTGAAACCGGCGGGTTTCACGGTGGAGAAGATGTCGGCGAGAGGATTACCGTCGCTCACAAGAGCTCCTCCTTCTTCCTTCAG
AATCGTCGCGAGTGGCGTCAAGAAGATCAAGACAGACAAGCCCTTTGGAGTTAACGGCAGAGACCTGATGTTTGCGTTGATAACTG
GCTTGATAAGGATTACTCTGTGGTCACGGTTAGGTGTAAAGATAGACCGAAGCTTCTGTTTGACACTGTCTGCACTTTGACTGATA
TGCAGTATGTTGTCTTCCATGGAAGCGTTGATAGTGAAGGCACAGAGGCGTATCAGGAGTATTACGTGAGACATATAGATGGTTCC
CCTGTGAAGTCAGAGGCTGAGAAGCAAAGAGTCATACAGTGTCTTGAAGCAGCTATCAACAGAAGAGTATCTGAGGGGTTGAAGTT
GGAGCTGTGTACTACGGATAGAGTAGGGTTGTTATCAAACGTGACCCGCATATTCCGTGAGAACAGTCTAACGGTTACGAGAGCTG
AAGTTAAAACCAAAGGAGGCAAAGCTCTGAACACGTTCTATGTTAGTGATGCGTCTGGTTACTCTATTGATGCCAAGACTATAGAT
GCCATAAGACAGACCATTGGCCAGACTATACTCAAAGTCAAGAACAACCCTGAAGAACAACAGCAACAGAGACAAAAACCTTCTTC
ACAAGAGTCCCCAACCAGGTTTCTCTTTGGTGGTCTTTTCAAATCGAAATCTTTTGTCAACTTTGGCTTGGTTCGGTCCTACTCTT
GAAGGAACATGTTAGCTTAAGTCTCATCTAGGTTTTTTTAATTGCTTCTTTAAACTTGAGAAGAATGAATCTGTAAATATTTTTTC
ACCAGATATAAGCTTAGTTCTTGGTCTAGGATCCAACGTTGTGTAGGGCATATGACTAAAGATTTAAGTGTTATAACCTCCACTCT
TTTGTATATATGATCAAATTCTCATAATATGTTTATGTCAAATGAAAGTTTTCATGACCTTAAACAAATACTATATAATGAATATA
ATGACAAAATTGTGGTGGGTGAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ACG60681 unknown protein [Brassica oleracea var. alboglabra] | 1053 | 2e-112 |
| BAJ33767 unnamed protein product [Thellungiella halophila] | 1035 | 3e-110 |
| BAC43240 unknown protein [Arabidopsis thaliana] | 1028 | 2e-109 |
| NP_177067 ACT domain-containing protein [Arabidopsis thaliana] | 1028 | 2e-109 |
| NP_974107 ACT domain-containing protein [Arabidopsis thaliana] | 1028 | 2e-109 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P49108 Photosystem II 10 kDa polypeptide, chloroplastic | 276 | 1e-023 |
| P27202 Photosystem II 10 kDa polypeptide, chloroplastic | 246 | 4e-020 |
| Q40163 Photosystem II 10 kDa polypeptide, chloroplastic | 178 | 3e-012 |
| P06183 Photosystem II 10 kDa polypeptide, chloroplastic | 171 | 2e-011 |
| Q40519 Photosystem II 10 kDa polypeptide, chloroplastic | 163 | 2e-010 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B4YPV8 Putative uncharacterized protein | 1053 | 2e-112 |
| Q3ECF7 Putative uncharacterized protein At1g69040.2 | 1028 | 1e-109 |
| Q8GWT8 Putative uncharacterized protein At1g69040/F4N2_2 | 1028 | 1e-109 |
| Q8LJW3 ACR4 | 1028 | 1e-109 |
| Q9LQB5 F4N2.2 | 1028 | 1e-109 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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