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Information for unigene UN25140
| FASTA Sequence |
| Unigene ID: UN25140 | Length: 660 |
SSR | | GGCTCTAAGTGTAAATTTTTCATATATATATATAGCAAGTAGAAGGGATAAACAATATAGGGATAGATGACCTTCTAGGCTTCTAC
GACACATAGAAAACCAGGAAATAGAACAAGAGTCTAACATTTTGTCACATACACGACAATTATTGAAAACAAGGAGAACAACAACA
CATACAATACATAGATTATGGATATGCTTCTTAGGCAGTGTCAACTGCAATAGCTGATCCCTTGGTGCAGAAATGAGAACATGCGT
TGGTGCATTGTGCAACCGCTCCATTCACAATTTCACCTGCATCGAAGTCCTCGAGAGTGGCTAAGTCACTGCACACAGAGGATGCA
CAACCCAACTTGCAGTATTCATTGACAGTTTCACCAGAGTTGTAAAGGCCATATGGATATTTCTTAATACATTTATACCCAGGAAC
GACTATGCATCCACTAAGTTGTGCACAAACCTTGTTCGGTTTAATAAGAACACATTCACGAACCACTAAGCTGGCTGCCCTGGTCG
GGCAACAAACGTTTGCTTCGACTTGATTATGCACCATGAAAAAACTCATTATGAGCACACTTAAAATCACAGTTTTGCCTTCCATT
TTAACACTGATTACTTGTTTGGTCACAAAATGTACTTAGAGATTACAACTTGTATTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAB33009 crambin precursor=thionin variant Thi2Ca10 [Crambe abyssinica, seeds, Peptide Partial, 134 aa] | 408 | 5e-038 |
| AAB33005 crambin precursor=thionin variant Thi2Ca3 [Crambe abyssinica, seeds, Peptide Partial, 133 aa] | 402 | 3e-037 |
| AAB33004 crambin precursor=thionin variant Thi2Ca2 [Crambe abyssinica, seeds, Peptide Partial, 134 aa] | 386 | 2e-035 |
| ACJ68108 thionin precursor [Brassica napus] | 381 | 7e-035 |
| AAB33011 crambin precursor=thionin variant Thi2Ca12 [Crambe abyssinica, seeds, Peptide Partial, 135 aa] | 379 | 1e-034 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q9S976 Crambin=THIONIN variant THI2CA10 (Fragment) | 408 | 4e-038 |
| Q9S980 Crambin=THIONIN variant THI2CA3 (Fragment) | 402 | 2e-037 |
| Q9S981 Crambin=THIONIN variant THI2CA2 (Fragment) | 386 | 1e-035 |
| D2CVR6 Thionin | 381 | 5e-035 |
| Q9S974 Crambin=THIONIN variant THI2CA12 (Fragment) | 379 | 9e-035 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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