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Information for unigene UN25170
| FASTA Sequence |
| Unigene ID: UN25170 | Length: 857 |
SSR | | GGCTACACACCAATCAAGAGAGAGAGAGAGATATGGGAATGATGAGCTTGAGCAGCGTAATGGTTTTGGTGATGATACTGTTAGTG
CAAGTATCTTCGACGCAGTACAAAGTTGGGAACTTGGACTCATGGGGTATCCCGGTTGATGCTAAAGTCTACTCCAAATGGCCCAA
ATCTCACTCTTTCAAGATCGGTGACTCCCTCTTGTTCTTGTACCCACCAAGCGAAGATTCAATGATTCAAGTGACACCTTCCAACT
TCAAGAGCTGCAACACCAAAGATCCAATCTTGTACATGAACGACGGCAACTCTCTCTTCAACCTCACCCAAAACGGAACATTTTAC
TTCACCAGCGGACATCCTGGCCACTGTCAAAAGTACCAGAAGCTCATTGTCTCCGTCGGCACTTACTCCGCCGAAGCAGACGCCTT
GTCTCCCTCGTCTTCTGCCGATGCCGATGCTCCCTCTTACCAAAACGCATTTGGATCTATCCCACTCTCTCAGAAATCTTCTTCTT
CGTCGCTGCGATTTTCCACCGTCGTTGCTTCGCTGGCCTGCGCTGTCGTCGTCGGTGCTATCATGTGAAAATGGCAAATTATTGAA
TATTTTATTAATTTTGTTCTGTCCAAAAAGCAAAAGTGATTGGTTCTTTTTGAAGAGGGCAATTTTGAATATTTTTTTATTATTTA
GCAAAAAGTGATTGGTTCCTTTTTTTCTCTTTCTGATCTCCTCTTAATTATTTATTATATTTCTTGTCGTTTTCTTAAATTCCCAT
TATGTATTTCCAAATCTGAAACTTTCAACCAAATAGAGGTTCGGATCAATACTACCATAATTTTAATATTTGGAATTTTCTTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002886333 hypothetical protein ARALYDRAFT_474878 [Arabidopsis lyrata subsp. lyrata] | 751 | 2e-077 |
| NP_176645 early nodulin-like protein 8 [Arabidopsis thaliana] | 739 | 4e-076 |
| XP_002518894 Stellacyanin, putative [Ricinus communis] | 478 | 7e-046 |
| ACU16613 unknown [Glycine max] | 474 | 2e-045 |
| ACU16793 unknown [Glycine max] | 470 | 6e-045 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SK27 Early nodulin-like protein 1 | 210 | 4e-016 |
| P80728 Mavicyanin | 203 | 2e-015 |
| Q9T076 Early nodulin-like protein 2 | 197 | 1e-014 |
| Q02917 Early nodulin-55-2 | 183 | 5e-013 |
| Q41001 Blue copper protein | 172 | 1e-011 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q6NLD7 At1g64640 | 739 | 3e-076 |
| B9RYS5 Stellacyanin, putative | 478 | 5e-046 |
| C6T4K3 Putative uncharacterized protein | 474 | 1e-045 |
| C6T511 Putative uncharacterized protein | 470 | 4e-045 |
| B9GK88 Predicted protein (Fragment) | 453 | 4e-043 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G64640.1 plastocyanin-like domain-containing protein | 760 | 6e-081 |
| AT3G18590.1 plastocyanin-like domain-containing protein | 264 | 2e-023 |
| AT3G20570.1 plastocyanin-like domain-containing protein | 251 | 6e-022 |
| AT1G48940.1 plastocyanin-like domain-containing protein | 229 | 2e-019 |
| AT1G79800.1 plastocyanin-like domain-containing protein | 221 | 2e-018 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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