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Information for unigene UN25197
| FASTA Sequence |
| Unigene ID: UN25197 | Length: 1448 |
SSR | | GGAATCTAGAAAACCACATTTCAACAGAAAGACTCCCATTCGCTAAGCAATCAATTTCGAGATTTTAATAAAGTCTTTTTTGTCTT
TTAATTCCAGTCACCAACCCTGGCTTTCATCTCTCTCTCCGGTAACAAGAACCGTCGGAAAAGAAAATACCGGACCATGGAGAGTG
AGGCTTGGAAGGCACACGTGGCCATGGTCTGCGTTCGATTGTTCAACGGAGGTTATCACGTGATCACCAAAGTAGCTCTCAACGTC
GGGGTGAACCAACTCGTCTTCTGCGTCTTTCGTGATCTCATTGCTCTTTCCATTCTCGCTCCTCTTGCTTATATCCGTGACAAGAA
GACAAGACCTCCTTTGAACCGACGCTTTCTCTTAGCTTTCTTCTTCCTCGTCTTAACTGGGATATTTGGGAACCAGCTTTTGTTCC
TCGTTGGTCTCAATTACACCAATCCCACTTATGCTGCAGCCATTCAGCCCTCTATTCCCGTTTTTACTTTCATCTTGGCTCTCATT
ATGGGAACAGAGAGATTGAATTTATTCAAACTAGAAGGTCAAGCTAAGGTAGGAGGTACGCTGGTCTGTGTCTCTGGGGCCGTGTT
GATGGTTTTGTTTCGTGGACCGGCTTTGTTTGGGGAAACAGAGCCTGACTTCTTGGGTCATGGTGAGATAAGACACCCTGAAGCAT
CTGGATCTGGACACTTGGTGTCTAGCTTTCTCAATGGACTTGGGAGATGGAATCTGGGAGTTTTGTGCTTGATTGGGAACTGCACT
TGCATGGCTGCTTTTCTTGCTATTCAGGCTCCAGTTTTGAAGAAGTATCCGGCAAATCTTTCAGTTACAGCGTACTCGTATTTCTT
TGGGACCATGTTCATGGTGACATCTGCTTTTTTCATGACTAATGAGTCAACCAACTGGAGTCTCACAAGATCCGAGTTTTTTGCAG
TTGTCTATGCAGGAGTAATCGCATCTGCCCTTAACTATGGTCTCTTGACGTGGTCAAATAAGATTTTGGGTCCTTCCTTGGTTGCT
CTGTATAACCCTCTTCAACCTGGAGCCTCAGCCTTCTTGTCCAGAATCTTCCTAGGAAGCCCTATCTACTTGGGGAGCATTTTAGG
CGGGTGTGCAATCATCGCAGGTCTTTACAGTGTCACTTGGGCGTTTTACAAGGAAAAGAAAGCAGCAGCAGCAGCAACAGGTACCA
TCCCGATCACCTCAAAGGAAGCTGAACCCTTGATCTACAAAGACCACAAGAACAAACCAATGGGACATCTATTCACAAACATTCCC
ATCTCTTCACCAAAATCTGCTGATTGAACCAAATGTCAGGCTTCTTGAAATCGGGCCTGTGATGTTTTCTTCATCTTCTTTTGCGG
TACTAGTGACTATTAAACACATCAATATTTACATGCCTTAAACAAATCATAGAATTTAAGAGCTTTCATCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002875755 hypothetical protein ARALYDRAFT_484967 [Arabidopsis lyrata subsp. lyrata] | 1789 | 2e-197 |
| NP_190173 nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana] | 1786 | 3e-197 |
| XP_002268531 PREDICTED: hypothetical protein [Vitis vinifera] | 1385 | 1e-150 |
| XP_002519927 Auxin-induced protein 5NG4, putative [Ricinus communis] | 1361 | 6e-148 |
| NP_567580 nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana] | 1343 | 8e-146 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q5PP32 At3g45870 | 1786 | 2e-197 |
| B9S1R2 Auxin-induced protein 5NG4, putative | 1361 | 4e-148 |
| Q8W4R9 AT4g19180/T18B16_150 | 1343 | 5e-146 |
| Q8LAX2 Putative uncharacterized protein | 1314 | 1e-142 |
| C6TI99 Putative uncharacterized protein | 1307 | 8e-142 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G45870.1 integral membrane family protein / nodulin MtN21-related | 1790 | 4e-200 |
| AT4G19185.1 integral membrane family protein | 1344 | 2e-148 |
| AT5G45370.2 nodulin-related / integral membrane family protein | 1227 | 8e-135 |
| AT3G45870.2 integral membrane family protein / nodulin MtN21-related | 1208 | 1e-132 |
| AT5G45370.3 nodulin-related / integral membrane family protein | 769 | 1e-081 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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