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Information for unigene UN25204

FASTA Sequence
Unigene ID: UN25204Length: 1636 SSR 
AAATCTGATCTCTTAACTTGGAAAGAGAAAACAACCAACAAGAAGCATAAATAAACAAAAGCCAATGTATGGAAACAATTTTTTTG
GTTCATGAGTAAAGCAAATAACAGAAAAAAAAAAGAGAAATATAACAAGAATATGATTGTCTGATGCAAAGAGACTCAGAGAGACC
AGTTGTGATGGTGTGAAGAAGAGTCATAAGCCCTTGAGTTCTCACCTTCCATGTACTGCCTCCTATTCTGATGTTGATGGTCAGAT
AACTCGAACTCACCCATTGTCGTTCCACCGCCCATCTCTGTCTCGGTGAATCGCCCCAAATTCAAAACAGGAGACATATCATTCTG
ACAGTTATTGTCATCGTCCTTAAACACCCAAGGCGGGTTCAGATACTGATGCTGGCTAGGTGCAGGTGGTGGCTGAGCCATTGTAA
CCGTCATCGGACCAAAACCTGAAGAAGTTCTCCATGTGTTGTTGTCGTTGGTGTTGTCATGTGGCTGGTGTGGGTTTGACAGAAGA
GAGAGAGCACAGTTTGAGTCGCTGCCAATCCCCTTGTAGCTCTCTGGTTTAGTGTCCATAACCTCTGGAGATGAGAAGCTTATCCC
TCCTCCTCCTCCTCCACTGACTGATCCTTGACTAAACACGTTCATCGGATTGATCTGCCACGACGGTCGTCTCATCACTCTTGTAT
CCAACGTTCTTGTATTTGTCCAACCCATTTCTTGGGAACCAAGAAAGCTCCCATTCATTGTAGTTTCAGCATTTCCGTAAAGCGAA
GGTGCTATCCTCCCGTAACGAGAAGACAACACAGAGAGAGACGCAGGCTGTGGTTTCCTCCGTCTCTCATTATGACCAGCGAGTCT
CCTACGGCAACTCCTTTTCTCTAGGTCAAATTCCGGAAGCTGATGAAAGCTGCTGCACTGTTGACAGAACCTTTGTTCGATACCAG
CGACAATGACTTTGGGTGTTTTAGAGTGCACTCCACACACTCTGTGCCTAGAGTAATAACCCTTTGCATTGGTTAGATCCATTCCA
CAACCTTCCACTTGGCACCTTGGTATCTGACCCGAAGGACCCGACCCGCCACCACGTACCCTTCTGTTTGACCCGCCGGAGGAAGA
AGACCCGGTTCCACCTCCAGCGTCCTCGAAGTAGATCCTCTGGCCAAACATGAGCCCTCCGCTTAAAGAGGATGACTCAGTCGATG
AACCACCCGACTCTGCTTGACCTGGACCACGACCAGGACCCGAGTTGGAACCCATATTCATTTTTGTTTCCTCTTACTCAGACAGA
AAGAGAGTACTCACACATCATTCTCTCTCTCTCTCTCTCTTTATTAAACCTAACTGTCTTGGTTTAAAGAAAGGACGAAAGGAGAA
GAAAGCAAAGAAAATATTGGCTTCCCTGATTTTGACTGTTGTTGGGTTTAGAGAAAGAAGTGAGAGAAACACAACAGAAGCTAAAA
AAGATGAGAGTGTGGTAATAGACAAAGACAGCGAGATAGTTATAAAACGGTACGGACAAAACAAAAACTGTTGTCTGTTAATTACC
ACTGATTACCACATAGCAAAAACAAGAGAAAGATAGATAGAATGATGTAGCAGTTTCTAATCTTGGAGTTGGAAGAGACTTGAGCC
CC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34624 unnamed protein product [Thellungiella halophila]16986e-187
NP_181749 squamosa promoter-binding-like protein 9 [Arabidopsis thaliana]16512e-181
CAG25585 putative squamosa-promoter binding protein [Arabidopsis thaliana]16484e-181
XP_002879972 hypothetical protein ARALYDRAFT_903568 [Arabidopsis lyrata subsp. lyrata]16484e-181
AAK76681 putative squamosa-promoter binding protein [Arabidopsis thaliana]16459e-181

Swiss-Prot top hits (Blast detail)Scoree value
Q700W2 Squamosa promoter-binding-like protein 916517e-183
Q9M2Q6 Squamosa promoter-binding-like protein 156168e-063
A3C057 Squamosa promoter-binding-like protein 174106e-039
Q7EXZ2 Squamosa promoter-binding-like protein 143927e-037
A2X0Q6 Squamosa promoter-binding-like protein 33471e-031

TrEMBL top hits (Blast detail)Scoree value
D6QZ29 Promoter-binding protein SPL96894e-070
B9II11 Putative uncharacterized protein6384e-064
Q9SNV4 Squamosa promoter binding protein-homologue 4 (Fragment)5254e-051
Q9SNV3 Squamosa promoter binding protein-homologue 5 (Fragment)5102e-049
A2Q4T4 SBP4914e-047

Arabidopsis top hits (Blast detail)Scoree value
AT2G42200.1 SPL9 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 9); transcription factor16525e-184
AT3G57920.1 SPL15 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 15); DNA binding / transcription factor6175e-064
AT1G27360.1 squamosa promoter-binding protein-like 11 (SPL11)3334e-031
AT1G27360.2 squamosa promoter-binding protein-like 11 (SPL11)3334e-031
AT1G27360.3 squamosa promoter-binding protein-like 11 (SPL11)3334e-031

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
85  38%
 
106  46%
 
91  8%
 
111  8%

Unigene MembersMember information