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Information for unigene UN25215

FASTA Sequence
Unigene ID: UN25215Length: 767  SNP
GGATCGCTTGAGGTTTCTTCCGCACTGCCAACCCCTCTCGAGACGAAAATGGTTGCTTTCAGGTTTCACCAGTACCAGGTTGTCGG
AAGAGCTCTCCCGACAGAGAAGGATGTGCAGCCCAAGATTTACAGGATGAAGCTTTGGGCCACGAACGAGGTTCGTGCCAAGTCCA
AGTTCTGGTATTTTTTGAGGAAGCTGAAGAAGGTCAAGAAGAGTAATGGACAGATGCTCGCCATTAACGAGATCTTTGAGAAGAAC
CCGACGACCATCAAGAACTTCGGAATCTGGTTGAGGTACCAGAGCAGAACTGGGTACCACAACATGTACAAGGAGTACCGTGACAC
TACCTTGAACGGAGCCGTCGAGCAGATGTACACTGAGATGGCATCCCGACACCGTGTCAGGTTCCCTTGCATCCAGATCATTAAGA
CAGCAACTGTTCCCGCCAAACTCTGCAAGAGGGAGAGCACCAAACAGTTTCACAACAGTAAGATTAAGTTCCCCTTGGTATTCCGC
AAGGTGAGACCACCAAGCAGGAAGCTCAAGACCACTTACAAGGCATCCAAACCCAACCTTTTCATGTAATAAGTCTCTTATTGACT
TTCACATCTTTTTTGGTTGGGGGCTAGTATCGTTATGATGTCTATGTTATCTGCTCTTTTGGCTTTTGTTTCTTCTTGGATATTTT
TGCTTATCAATATTTTAGATGTTGTGTCCATCAAACTAAAGTACTCTCTCTTTCTTATGAAAAAACTTTTACCTTGTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_180995 60S ribosomal protein L18a-2 [Arabidopsis thaliana]9293e-098
XP_002317384 predicted protein [Populus trichocarpa]9052e-095
ABK93213 unknown [Populus trichocarpa]9024e-095
XP_002305712 predicted protein [Populus trichocarpa]8953e-094
ACU14501 unknown [Glycine max]8901e-093

Swiss-Prot top hits (Blast detail)Scoree value
P51418 60S ribosomal protein L18a-29291e-099
Q9LUD4 60S ribosomal protein L18a-38824e-094
Q9ATF5 60S ribosomal protein L18a8743e-093
Q943F3 60S ribosomal protein L18a8555e-091
Q54MK8 60S ribosomal protein L18a4882e-048

TrEMBL top hits (Blast detail)Scoree value
A9PBF7 Predicted protein9051e-095
A9PA10 Putative uncharacterized protein9023e-095
A9P8L2 Predicted protein8952e-094
C6SZ28 Putative uncharacterized protein8907e-094
A9P8B1 Predicted protein8843e-093

Arabidopsis top hits (Blast detail)Scoree value
AT2G34480.1 60S ribosomal protein L18A (RPL18aB)9309e-101
AT3G14600.1 60S ribosomal protein L18A (RPL18aC)8833e-095
AT1G29965.1 60S ribosomal protein L18A (RPL18aA)8815e-095
AT1G29970.2 RPL18AA (60S RIBOSOMAL PROTEIN L18A-1); structural constituent of ribosome8734e-094

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  10%
 
75  25%
 
108  40%
 
115  25%

Unigene MembersMember information