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Information for unigene UN25238

FASTA Sequence
Unigene ID: UN25238Length: 1591 SSRSNP
GATTACAGCCATAGTGTTCTTATAGGCAAAGTTCAATGCCAAAGAGCAAGGATGGCATACCGGGTGATTATTTTAGTGGTGGTAGA
ACCGGATAACGGAAAGCTTAAAAGTTGCAGGAATCAATAAATTTAAGGGAATGATTGTAGCTAGTGACCTGAATTTACTTGTATAT
CACAGGAAATAACCGCTTTAACATTAAAAGTTTACTCTCTCTTGAGTTATTTAGAGAAGGACTTGTTTCTCCAGGTCTTAAAGCCA
CAAGAGGTAATAACTTCTAGAGACCCCATTGGTTAATAAATGCTCATCCATGTGAGAGAGCCGGGAAAAAAGGGGATTCCATTTCA
TTTTCTTGTTGTGTGTCTTTCTCTATATATCATCCTTCATCACTCAAGATATGCTTCACTTGTTAACATTCCTACAAACTGTAGCC
AAGAAGACCATTCATTCCTTTTGTGCTATGATGATCATGTGAGATGAATGAGATATCTCTTACTAGCTTATTCTTTGTTCTGTAAT
AAGATTTAGAAAGAAAAGATGGGTAGATCACCGTGCTGTGACAAGATGGGTTTGAAGAAAGGACCATGGACATCAGAAGAAGATCA
GAAACTTTTGGCTTATATTGAAGAACATGGGCATGGAAGTTGGCGTTCACTGCCTGAGAAAGCTGGTCTCCATAGATGCGGCAAAA
GTTGTAGACTCAGATGGACTAACTACCTAAGACCAGACATCAAAAGAGGCAAATTCAACTTGCAAGAAGAACAAACCATTATTCAA
CTCCACGCTCTCTTAGGAAACAGGTGGTCGGCGATAGCGACTCATTTGCCAAAGAGAACAGACAACGAGATAAAGAACTACTGGAA
CACGCACTTGAAGAAACGGTTAGTTAAAATGGGGATAGATCCAGTGACTCATAAACCCAAAAACGAGACTCCTCTGTCTTCTTCTC
TTGGTGGTTTATCAAAGAACGCAGCCACACTTAGCCACATGGCTCAATGGGAAAGTGCTAGGCTTGAAGCTGAAGCAAGGCTAGCT
AGAGAGTCAAAGCTTCTTCTTTACCAAACCAAAGTATCATCATCATCATCATCTTCTCATCATCATCAGCAGCAGCTTGAATCTCC
GACATCTACAGTGTCATTCTCGGAAGCGAAGACAGAGTTCGTCGGATCATCATCATCATCAACGTGTCTAAATATGATCAAAGAAG
CTGAAAACGATTGGATCAGTTCAACGATTCACGAGTTCCAAGGAGTCGAAGAAGGGCTCACGGGTCTCTTGCTAGGTGGCGGTGAT
TCGCTTGGCCGGAGTTTCTCAACCGATAAAAATGAGACTGCTGGCGAGACTAGTGGTGACTGTAACAACGGTTACTATGAGGACAA
CAAGAACTATTTGGACAGCATTTTCAGCTTTGTGGATCCTTCGCCGTCCGATTCAGCTCCTTTGTTTTGAATCAAGGGCTGATATC
TCTCTAGAGGAATGTTTTGGATTCTTTTTTTCTTTTGTCAACGAATGTTTTGGATTCTTTTAGTTCTTAATTTGTGGGATGTGTAA
ACTCTCTGATTAGATAAAAAAGTTTTTTAATCTGTTTTTTTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_001078589 myb domain protein 16 [Arabidopsis thaliana]12183e-131
BAJ34432 unnamed protein product [Thellungiella halophila]9665e-102
XP_002871660 AtMIXTA/AtMYB16 [Arabidopsis lyrata subsp. lyrata]9092e-095
NP_197035 myb domain protein 16 [Arabidopsis thaliana]9073e-095
AAF26160 putative Myb-related transcription factor [Arabidopsis thaliana]8446e-088

Swiss-Prot top hits (Blast detail)Scoree value
Q8GWP0 Transcription factor MYB395522e-055
O49608 Transcription factor MYB325477e-055
Q50EX6 Protein ODORANT15235e-052
Q9SZP1 Transcription repressor MYB45154e-051
Q38851 Transcription repressor MYB65154e-051

TrEMBL top hits (Blast detail)Scoree value
Q9LXF1 At5g153109072e-095
Q9LE63 Putative Myb-related transcription factor8444e-088
Q6R098 MYB transcription factor8346e-087
B9IK06 Predicted protein8292e-086
Q02992 Protein 18249e-086

Arabidopsis top hits (Blast detail)Scoree value
AT5G15310.2 ATMYB16 (MYB DOMAIN PROTEIN 16); DNA binding / transcription factor12198e-134
AT5G15310.1 ATMYB16 (MYB DOMAIN PROTEIN 16); DNA binding / transcription factor9071e-097
AT3G01140.1 MYB106 (myb domain protein 106); DNA binding / transcription factor8282e-088
AT3G61250.1 AtMYB17 (myb domain protein 17); DNA binding / transcription factor6426e-067
AT1G34670.1 AtMYB93 (myb domain protein 93); DNA binding / transcription factor6141e-063

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
65  56%
 
94  44%

Unigene MembersMember information