Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN25277

FASTA Sequence
Unigene ID: UN25277Length: 1400 SSR 
AAAAATAATATTCCAATAGTACTTAACTCAGTCTAACGATTACATTACAAGACATAAGTGAAAGAAGAGGGTTCGGAAATAAGTAA
ACAAAAGAGGGAGAGGAAGTGTTTAAAATATGTATCGTCACAATCACAGGTTTCAGCCACAAGGAGTGAGTTTCTTGTTACCTGCA
CCACGAGGATTATCGTCCTTCCAATCATCGAAAGCTCTAGCTTTCATCACAGCTTCTTCGTCTTCATCATCATCTTCTTCATCCTC
TTCCTTTCTTCTCAGAGGTTTGTCATTGTGCCATGAGGTGGTTGCTTCTTCAATTGCTTTTTTCGTCTGCTCTTGCCAATCATTCA
TTATATTCATCTCTGTTAACCCAGCATCCTCTATGCTCATCGTCGGCATCCTGTGACTTGGTTGGAAAACTTGAGCTATCATTCTC
TCTCTCTCTCCGTAGAAAGACCTCCATTCACGATGCTTGCTGGACCGAATATAAGAGGTTGATGCTTGTGTTCGTGACCCTGTGAT
ACTGAAGCTCTACCTTCTAACACATCTTGTGCAAATGTGGCACAAGTGATTGGTTGTGCCGGTCTAGAGTACTGTACCCTCGCAGC
AGCATCTCTGTGCCATGTTTCAGCTTTCTTTGTGCGATCATCAAGCGCATCCCGAGAAAACACATCCTCTCCATCCTTTAACTGTT
TCTCCTTGATTGCCGAGAGCATTTCCTCTTCTCTCTTTAGCATTTCCAACAGATCAATAGCCTTACAAATAGCCAAGTTAATTGTG
GCGAGCCACGCGTCTCTTTCTTCTTCGCTGTCATCATCTGGGATGTCATCTTCTCCAGATTCAACCGGAGTAGACAAGGCAGCAGC
CCTTTTTGAACGCCCGCGTCGCTCCTTCGTCTCTTTAATCTCAAGGAGCTTCGCCTCTGCAGCCTTTTGACGTTTGAACCGAGCTA
TCTTGAGAGCTCTTCGATCAGCAGGTGGAGCAGAACCACCTCGTGAAGAAGCCTCCAACTCCTCTTCCGGAACAAGTTCCATTGCC
TCACAGAACGAAAAGAACTCCTTCAACTTAGCATAAGAAGCTTTGACAATCGGAATCCGATCTTCCTGTTTGATTTTCTCTGTCAG
CTCCGCCAGATAGAAAGGTACCAAAAGATACTTGAGATTGTTGGTGCTGATATCTTCTTTAGTCTCGTTAGAAGAGAAGAGCCCCA
GCTTCCCCACCATGTCTTCGCACTTGTCTAACATCTCACATCCTTTCTTCACATCATCCTGATCAGCGCGAGATTCTGAAGCCGCG
AGATAAATCTTCCTTGCTTCCTCGAACAACGCCGATAATGGCATCTCCTCCATCGCTACACCTCCCATCACTCACGAGATTCACTA
TCAAAACGAGAAAGTGGATCGGTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_568783 PP2A regulatory subunit TAP46 [Arabidopsis thaliana]14092e-153
AAM63076 PP2A regulatory subunit [Arabidopsis thaliana]14092e-153
XP_002880896 hypothetical protein ARALYDRAFT_901608 [Arabidopsis lyrata subsp. lyrata]13851e-150
XP_002865947 predicted protein [Arabidopsis lyrata subsp. lyrata]13795e-150
XP_002277330 PREDICTED: hypothetical protein [Vitis vinifera]11968e-129

Swiss-Prot top hits (Blast detail)Scoree value
Q8LDQ4 PP2A regulatory subunit TAP4614097e-155
Q9Y7T1 Uncharacterized protein C63.051911e-013
Q61249 Immunoglobulin-binding protein 11713e-011
O08836 Immunoglobulin-binding protein 11677e-011
P78318 Immunoglobulin-binding protein 11605e-010

TrEMBL top hits (Blast detail)Scoree value
B9T3G2 PP2A regulatory subunit TAP46, putative11761e-126
D2K8N5 Tap4611473e-123
B9I1X0 Predicted protein11446e-123
B9IDQ0 Predicted protein10721e-114
B4FQH3 Putative uncharacterized protein10712e-114

Arabidopsis top hits (Blast detail)Scoree value
AT5G53000.1 TAP46 (2A phosphatase associated protein of 46 kD); protein phosphatase type 2A regulator14096e-156

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
63  60%
 
92  40%

Unigene MembersMember information