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Information for unigene UN25301

FASTA Sequence
Unigene ID: UN25301Length: 1145 SSR 
GGGTCGGTTATCAGTTTTCATCGCTCTCTCTCTCTCTCTTTACGCTGAGCCCCGATCGGAAGGTTGATTTTGGGGGCAATTGCTTC
TTCTCTCTCCGTCCAGCTCAATTCTCGATCAAAAAGACAACTTAACTTGGAGATATGAAGCAGATTGTTTACCATACGTTTTGAGG
AACTAGAGACTTCTTTATATAGAAACTACTTTCAATCTTTTGTTCTGAGGTTAAGAAATCATAGAGAGGAGGAGGAGGAGAAGAAG
ATGGGATGTGTTTCATCTTGCTTTCGAGTCCAAGACATTGATGAGTACATGAATCCAAATAGCTCTGTCTATAGGAACTGTCCCTG
CATAAGATGCCTTGCTCGTAACTTCCTTAACCTGTATGTATCCATGTTCGGAAGAGGGGAAACCCGCGCTCTACCATCTTCCGTTC
AAGCTAGCACTACTGCATCGATAACTTCCTCTTCTTCGCACGATAACTTTCTATCTGAAGCCTTCCGTTCTACTCCGAGGCCACTG
CCTTACGACGCTGATCCTAGGCACTTCCGTTCGCTCGTCTCAAGACGGGAGAAGGGTTCAAGTCATTCCCATGAGGAAGCTGAACC
TCTGAGAAGTGATAGCGATGCGGATTCTGAATCTTTCGGATGCAAATGGGCAAATAACAAATCGGTTGTCTCTGAGAAAGATCCCA
AAGAAGAGTACTCCAGTAAATCCAGTCTTAGGATTATGAAATCAAAGTCAGCGTCTGGAAACATATGGGATTTTCCTTTGTCTGAA
GATGAAGATGCATGTCCAACTTGTCTTGAAGAATATACATCAGAGAACCCAAAGATTGTAACGAAATGTTCTCACCATTTCCACCT
TGGTTGCATTTATGAATGGATGGAGAGAAGTGAGAACTGTCCTGTCTGCGGAAAGGTGATGGAATTCAATGAAACACCATGAACAT
CAATCATCAATCATCTATCTGTGTGTCCTGTATCTGAACTGAAACCGGGGAAGATGGCAAGGCAATTGCAGAGGGGAGGTTTCTGT
AAATTTGGCTTGTTGGTTTTTGTGAATATTGTCATTTTACAATGTTAAAATATATGAAGCAGAAAGGGTGAAAATGTACCTCTGCA
ACATTTTAAGCTTTTTACGATATGGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882219 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]10489e-112
NP_566169 E3 ubiquitin-protein ligase [Arabidopsis thaliana]10462e-111
ABD96851 hypothetical protein [Cleome spinosa]9109e-096
ABD96894 hypothetical protein [Cleome spinosa]8866e-093
NP_197083 RING/U-box domain-containing protein [Arabidopsis thaliana]8508e-089

Swiss-Prot top hits (Blast detail)Scoree value
Q8LE94 E3 ubiquitin-protein ligase At3g0229010467e-113
Q9Y4L5 E3 ubiquitin-protein ligase RNF1151245e-006
Q9D0C1 E3 ubiquitin-protein ligase RNF1151245e-006

TrEMBL top hits (Blast detail)Scoree value
Q1KUY5 Putative uncharacterized protein9106e-096
Q1KUU2 Putative uncharacterized protein8864e-093
Q9LFU7 At5g157908506e-089
Q1KUQ0 Putative uncharacterized protein7889e-082
C6TMU9 Putative uncharacterized protein7271e-074

Arabidopsis top hits (Blast detail)Scoree value
AT3G02290.1 zinc finger (C3HC4-type RING finger) family protein10475e-114
AT5G15790.1 zinc finger (C3HC4-type RING finger) family protein8512e-091
AT5G15790.2 zinc finger (C3HC4-type RING finger) family protein8512e-091
AT3G02290.2 zinc finger (C3HC4-type RING finger) family protein7894e-084
AT5G38895.1 zinc finger (C3HC4-type RING finger) family protein6112e-063

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  50%
 
212  50%

Unigene MembersMember information