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Information for unigene UN25326

FASTA Sequence
Unigene ID: UN25326Length: 570 SSR 
CGTCACAAAGAGATTATTGTTATCTAATTGCCATTTTGCTGGAAGTACAAGTGCAAGAAACAAACAAGTAATGATGAAAAAATAAG
ACAAGATGACATGGTGTCTCAGATTTTGAACCTCTTGCGGGCAACTTATTAATAGAAGAAACCTAGGACCTGACCACCCACATTCC
GCTTGATAGCTTCTTCATGGTCCAAAATGCCATCAGGAGTTGTAACTACAACATAGCCCCACTGGCGGGTAGGAAGAGTGCGTTCA
GTGTATTGCTCAATCTCTTTAGCCCTGACGTCTTGCCTATAAGTGAGAGCTTTGCAATCATTAACCCTTCCTTGTAAGTCAACAGT
TATTCTTCCAACTCTGTGCGGATCATGGACTTGATAGTTCTTGATGTAACCTTTCTCCTTCATGATTCTGAGGAAGGAAGACATAA
CGGTAGAGACAGGCTTCAACTCCACCGAAGCTTTCCCTCGCTTCTCCGCATTCACGATCGTCCTCAACGCGTCGTTCAGTATCCTC
CTCCCCATTTCTCTCTCTCTCTCTCTCTCTAATTCGGTCAAAGAAGAAGTGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_194672 40S ribosomal protein S15a-5 [Arabidopsis thaliana]6494e-066
NP_179562 40S ribosomal protein S15a-2 [Arabidopsis thaliana]6396e-065
XP_002883974 RPS15AB [Arabidopsis lyrata subsp. lyrata]6315e-064
ACJ84070 unknown [Medicago truncatula]5591e-055
XP_002313996 predicted protein [Populus trichocarpa]5553e-055

Swiss-Prot top hits (Blast detail)Scoree value
Q9M0E0 40S ribosomal protein S15a-56492e-067
O82205 40S ribosomal protein S15a-26393e-066
Q9AT34 40S ribosomal protein S15a3643e-034
P42798 40S ribosomal protein S15a-13616e-034
Q00332 40S ribosomal protein S15a3616e-034

TrEMBL top hits (Blast detail)Scoree value
B7FH41 Putative uncharacterized protein5598e-056
A9PCW7 Predicted protein5552e-055
A5APE1 Putative uncharacterized protein5444e-054
C6SZ22 Putative uncharacterized protein5392e-053
B9RKC4 30S ribosomal protein S8, putative5382e-053

Arabidopsis top hits (Blast detail)Scoree value
AT4G29430.1 rps15ae (ribosomal protein S15A E); structural constituent of ribosome6502e-068
AT2G19720.1 rps15ab (ribosomal protein S15A B); structural constituent of ribosome6402e-067
AT1G07770.1 RPS15A (ribosomal protein s15a); structural constituent of ribosome3624e-035
AT1G07770.2 RPS15A (ribosomal protein s15a); structural constituent of ribosome3624e-035
AT5G59850.1 40S ribosomal protein S15A (RPS15aF)3624e-035

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information