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Information for unigene UN25353
| FASTA Sequence |
| Unigene ID: UN25353 | Length: 539 |
SSR | | GCGGTTTGTAATCGCTTCAGTGGACGATTAAAGTACATTAACAGAGGTTTCTTTTATAGATTTTATCAACTATGATCATACATACT
GACTGAGAAAATTTTGTAGACACAAAACAGACACACATGGAGTGGACATATATATATATTAGTTTAGTTGGTGAAAATGGTGAACT
TAGTTACGACAAATCTTGGCGGTAGGCATTGTGACACAGACAGGAGCACACTTCTTCTTGGCTGCTTCTGTCCCTCTCTTGGGTTC
TTCTTCTTCTGCCATGGCCACTTCGGCTAAGGTGCACACAGCCGCAGCTGCAGCCGTGAACATTAGATCCCTCCTCATCTTCATGC
TCTGTTCTTGCTTGGTTGTGTTATCGCTCGTGGAGGCTTTGACCACAGTGAGGCTTCGTCTGTTGTTGCCAGAGATGGTTGCTGGT
AGCTTTGAGAGGGTCGGGAGAAATGAAGATGTCATGGTCATCGAAGCCATCATAGAAAATTGTGATATTGATCTGCACGGCACGTG
ATCTCTTAATCTCTCTATGTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002894313 photosystem II 5 kD protein [Arabidopsis lyrata subsp. lyrata] | 424 | 4e-040 |
| BAJ34522 unnamed protein product [Thellungiella halophila] | 414 | 6e-039 |
| NP_564589 Photosystem II 5 kD protein [Arabidopsis thaliana] | 411 | 1e-038 |
| AAM61462 photosystem II [Arabidopsis thaliana] | 404 | 9e-038 |
| XP_002862672 hypothetical protein ARALYDRAFT_920397 [Arabidopsis lyrata subsp. lyrata] | 353 | 8e-032 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q39195 Photosystem II 5 kDa protein, chloroplastic | 348 | 2e-032 |
| P31336 Photosystem II 5 kDa protein, chloroplastic | 203 | 1e-015 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SYE2 At1g51400/F5D21_10 | 411 | 1e-038 |
| Q8LFE2 Photosystem II | 404 | 7e-038 |
| Q56YC6 Putative uncharacterized protein (Fragment) | 346 | 3e-031 |
| Q1WBW8 Putative uncharacterized protein | 334 | 9e-030 |
| A9PH14 Predicted protein | 240 | 7e-019 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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