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Information for unigene UN25376

FASTA Sequence
Unigene ID: UN25376Length: 907 SSR 
CGTGCAATCGCAACTCGTTGTCTCATTTTGAATCAAAACATTAACATGATAACACAATCTCAAATTACAACCAAACTTAAACTCAT
CATTATTCTTAAAAGCCAACGTGGAGACTCTTGAAAAGCTCTCTCTCTCTCTCTCTCTCGAGTTATATCCACAGTGAAGAAGCAGC
GATGGCTGCCACGGTGGCGATTATCCCGTATCTGATCCTCTCTGCATCAGATGAATCAGTAGACGTATCTCCACCACCGTCGCTAC
CGGAAGCTGAACCTGTCGTAACCGAGCCGCCTTTCTCAGGCGCCGGAGCAGGAGCCGCCGAGCTTGAACCAAACATTGCTAATGGT
AACAAAACTTGATCCACTTGATACACGGCGAGCTGCTTGTCGCTGTAGACAGAGTTAGCCACGGTGGCGCTCACAACACCCGTGGT
GATGTTGACTTGGTTACCAGAGCTAGTGATGTTAAGAGGGAATTCACCGTTCTGTCCATCGCCAGCTTGCGTGCGTAAGGGGTTAC
TGACAGTTTGAAACTGAGGCATGGTTAAGAGTGTAGGAAGGACATGGAACTGAACAAGCTGAACTTTTTGCTGGTCAGATAATGAG
TTTAAGGTTCCGGATTTGAGGCTGCTAAAGGCGTTATCGGTTGGGGCAAACACGGTTAGGCCTTGGCTCGAGGATGAATTGAGCTG
AGTGTTGATTTGGTCTGCGGCTTGGGTGCTCTTGAGGAGTCTTATGAACATTGTGAATTGACCAGCCTTTTCTAGAACTGCGGTTA
TGTTGGTTGGACCGGAAGGGGTTGGAGCTGGAGCCTGACCATTGGTTGTAGCTATAACCAGGAAGAAGATGAAGAGGTTTGAGGAA
ATAAATTTTCTCAAAATAGCCATTGTTGTTGTTGTGTGGTGGTGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002873077 hypothetical protein ARALYDRAFT_487087 [Arabidopsis lyrata subsp. lyrata]10423e-111
NP_195937 fasciclin-like arabinogalactan protein 11 [Arabidopsis thaliana]10389e-111
AAM62616 arabinogalactan protein-like [Arabidopsis thaliana]10371e-110
XP_002285068 PREDICTED: hypothetical protein [Vitis vinifera]7242e-074
XP_002519547 conserved hypothetical protein [Ricinus communis]7143e-073

Swiss-Prot top hits (Blast detail)Scoree value
Q8LEJ6 Fasciclin-like arabinogalactan protein 1110384e-112
Q8LEE9 Fasciclin-like arabinogalactan protein 125913e-060
Q9ZWA8 Fasciclin-like arabinogalactan protein 94954e-049
Q9FFH6 Fasciclin-like arabinogalactan protein 134703e-046
Q9SIL7 Fasciclin-like arabinogalactan protein 64372e-042

TrEMBL top hits (Blast detail)Scoree value
B9S0M8 Putative uncharacterized protein7142e-073
A9P8F7 Predicted protein7072e-072
B9MTA8 Predicted protein6954e-071
Q6J191 Fasciclin-like AGP 136954e-071
Q6J193 Fasciclin-like AGP 116911e-070

Arabidopsis top hits (Blast detail)Scoree value
AT5G03170.1 FLA1110393e-113
AT5G60490.1 FLA125912e-061
AT1G03870.1 FLA9 (FASCICLIN-LIKE ARABINOOGALACTAN 9)4953e-050
AT5G44130.1 FLA13 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 13 PRECURSOR)4703e-047
AT2G20520.1 FLA6 (FASCICLIN-LIKE ARABINOGALACTAN 6)4372e-043

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
114  50%
 
102  25%
 
81  13%
 
71  13%

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