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Information for unigene UN25392

FASTA Sequence
Unigene ID: UN25392Length: 1027 SSR 
GGATCCTCTTTAGCTGCAACTTCTTTTATTCAAATCTTTCTTCTCAAAATCATCAAACAATGGAATTCTGGGGAGTTGAAGTTCTA
GCAGGGAAGTCAGTTAAAGTGAAGCCTGATTTTGAAACACTCATCCATGTTTCCCAGGCATCACTTGATAAAGGGAAGAAGGGAGA
GACCGCTTTGTTGTATGTGACGGTTGATGGGAAGAAGCTTGTGATGGGAACCCTCTCTCAAGGCAACATTCCTCAGATTAGCTTCG
ATCTCGTCTTTGAGAAAGAGTTTGAGCTTTCCCACAGTTTGGAGAGCGGGAGTGTCCACTTTGTCGGGTACAAATCCCCCAACACG
CCCGAAGACGAGGAGGACTTCTCTGATTCAGAAGAGGAGGAGGAAGCGGCTGCAGTTCCTGCAGCTGTCACTGTCAAGGCTGACTC
GAAACCAAAGGCCAAGCCTGCCGAGGAAGTGAAGCCTGAATCAGACGATGATGATGATGATTCTGACGAGGAGGATGATTCTGAAG
AGGATGGATCCGACTCTGAGAAAGGAATGGATGTTGACGAGGATGATTCAGAGGATGAAGATGATTCTGAGGATGAAGATGATGAG
ACCTCTAAGAAGCCTGAGGTGTCCAACAAAAAGAGGCCTAATGAATCTGCTGCTTCCAAAGCATCTGTTTCAGCAAAGAAGGCAAA
ACCAGCTACACCACACCCAGCTAAAAAGGGTGGAAAGAGTCCTGTGAATGCTAACCAGAGCCCTAAATCTGGAGGTCAATCACCCT
CCGGTGGTGGTGCTAACAAGAAGCAATTCAATTCTGGCAAGTAATTTGGTTCTAACAACAAGGGCAAAGGAAAAGGAAAGGGCAGA
GCCTAAGTTTGAAGTGGGAGTTTTGGATGAAAGAAACCGGTTTTGTTTTTGTTTTTATTTTTATTTTTGTTGTCTTAAGATTTTTA
TCTAAATTGCAATTTTATAACTATTATGTAATTTCAGTATGAAAAGTGCTGGATTGAGAAAGAATACTTTTTTGAATCATG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ACF81501 unknown [Zea mays]4904e-047
ACZ54947 type 2 histone deacetylase c [Nicotiana tabacum]4895e-047
NP_001105631 histone deacetylase HDT2 [Zea mays]4887e-047
ACZ54945 type 2 histone deacetylase a [Nicotiana tabacum]4887e-047
XP_002875683 hypothetical protein ARALYDRAFT_484880 [Arabidopsis lyrata subsp. lyrata]4492e-042

Swiss-Prot top hits (Blast detail)Scoree value
Q56WH4 Histone deacetylase HDT28172e-086
Q9M4U5 Histone deacetylase HDT24883e-048
Q8LJS2 Histone deacetylase HDT14741e-046
Q9FVE6 Histone deacetylase HDT14435e-043
Q6V9I6 Histone deacetylase HDT14184e-040

TrEMBL top hits (Blast detail)Scoree value
B4FHA8 Putative uncharacterized protein4903e-047
Q3E700 Putative uncharacterized protein At5g22650.24232e-039
B9SN80 Histone deacetylase 2a, putative4222e-039
C6TC87 Putative uncharacterized protein4178e-039
C5YUI2 Putative uncharacterized protein Sb09g0267304105e-038

Arabidopsis top hits (Blast detail)Scoree value
AT5G22650.1 HD2B (HISTONE DEACETYLASE 2B); histone deacetylase8181e-087
AT3G44750.1 HDA3 (HISTONE DEACETYLASE 3); histone deacetylase/ nucleic acid binding / zinc ion binding4434e-044
AT5G22650.2 HD2B (HISTONE DEACETYLASE 2B); histone deacetylase4239e-042
AT5G03740.1 HD2C (HISTONE DEACETYLASE 2C); histone deacetylase/ nucleic acid binding / transcription repressor/ zinc ion binding4131e-040
AT5G63740.1 zinc finger protein-related1532e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  40%
 
91  20%
 
82  40%

Unigene MembersMember information