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Information for unigene UN25393
| FASTA Sequence |
| Unigene ID: UN25393 | Length: 1178 |
SSR | | GGGAGACCAGCGAGACTACTCTCGAGAGAGAGAGAGTCAAGAATGGCACCTTCGTCGTCGAGCGGTCTGACCTTCAAGCTCCACCC
TCTGGTAATCGTCAACATCTCCGATCACTACACCAGGGTCAAGACTCAGCTCAACCCTCCGCCAGGTTCAGTCTGCTCAACCGATA
ACAACGCATCCTCCAACAACAACAACGGCGAAGCAATGCTGCAGCCGACGAACCCTAGGGTTTACGGATGCGTGATCGGCGTCCAG
AGAGGCCGCACTGTCGAGATCTTCAACAGCTTCGAGCTTTTGTTCGATCCTTCGACGCAAACCCTCGATAGATCCTTCCTCGAGAA
GAAGCAAGAGCTCTACAAGAAAGTGTTCCCTGACTTTTACATTTTGGGATGGTACTCTACGGGGAGTGACGCTGAGGAGTCTGATA
TGCTTATCCACAAAGCCTTGATGGATATCAATGAGTCTCCTGTTTATGTGCTTCTTAACCCGGCAATCAATCACGCACAGAAGGAC
CTCCCAGTTACTATTTACGAAAGTGAGTTGCATGTCATTGATGGGATCCCACAGCTTATCTTTGCTCATACAAGCTACACAATCGA
GACGGTTGAAGCTGAACGGATATCAGTCGATCATGTTGCGCATCTCAAACCGTCTGATGGTGGTTCAGCAGCAACCCAGTTGGCTG
CTCATCTTACTGGGATACATAGTGCCATCAAAATGCTTAATAGCAGAATCAGAGTGCTGCACCAGTATCTTGCCGCAATGCAGAAA
GGTGATATTCCTTGTGAAAACTCACTTCTGAGACAAGTATCAAGCCTGCTAAGAAGGTTGCCTGCCATGGAATCAGAGAGGTTTCA
AGATAACTTTTTGATGGAGTACAATGACAAATTACTAGTAACTTACCTAGCAATGATTACAAATTGTACCAGCACCATGAACGAGA
TGGTGGACAAATTCAATACTGCTTATGACAGAAACACTCGAAGAGGTGGAAGAACTGCGTTCATGTAAAAGTTTCTGAAAACTTTT
TTTGCATTTGCCTTGGTGATAATCTATAAATGAGTCTCTTGTTTCCCTCGTGATTTTTTCTATCTATGTAAGAAGCTTCGCTGTAC
TGAATACTCTTGTTTGATTTTTTTCCAAGTTTCCATTGTTGGTAAAAAAAAGATTTTACG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002866135 hypothetical protein ARALYDRAFT_495718 [Arabidopsis lyrata subsp. lyrata] | 1472 | 6e-161 |
| NP_568839 COP9 signalosome complex subunit 6a [Arabidopsis thaliana] | 1464 | 5e-160 |
| AAL58106 CSN complex subunit 6A [Arabidopsis thaliana] | 1460 | 2e-159 |
| NP_567746 COP9 signalosome complex subunit 6b [Arabidopsis thaliana] | 1381 | 2e-150 |
| XP_002529210 signalosome subunit, putative [Ricinus communis] | 1377 | 7e-150 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8W206 COP9 signalosome complex subunit 6a | 1492 | 1e-164 |
| Q8W1P0 COP9 signalosome complex subunit 6b | 1409 | 6e-155 |
| Q54C92 COP9 signalosome complex subunit 6 | 569 | 1e-057 |
| Q6NUC2 COP9 signalosome complex subunit 6 | 540 | 3e-054 |
| Q07G98 COP9 signalosome complex subunit 6 | 539 | 4e-054 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q1EC57 At5g56280 | 1464 | 4e-160 |
| B9ST91 Signalosome subunit, putative | 1377 | 5e-150 |
| Q0J4P9 Os08g0500000 protein (Fragment) | 1272 | 7e-138 |
| Q2A0N7 COP9 signalosome subunit 6 | 1271 | 9e-138 |
| Q6ZKM2 Putative COP9 complex subunit 6 | 1271 | 9e-138 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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