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Information for unigene UN25404

FASTA Sequence
Unigene ID: UN25404Length: 1254 SSR 
GGATCTCCAAGCTCCTTCTTACCTTTCTTGTTCGGTAATACTCAACAAAACAAACGAGCAAGAGAGAGAGAGAGAGAGAGAGTAAT
GGCGATCAAGAACCTTCTTGTCCTTGCGGTTCTTCTAAGCGTTGTTGGAGTTTCAGTTGCTAACCCTAAGGGTCTTGACCTTAACT
ACTACAAACAGTGGTGTCCGGATGCAGAAGCCATTGTCCGTCGTACCGCAGTTCAGTATGTTTCTCGCCAGACGAGTCTTGCCGCA
GCGCTTCTAAGGATGCATTTTCATGATTGTTTCGTTAGAGGATGTGATGGTTCCATTCTTTTGAAATCTCCAAACAAGGATGCAGA
AAGAGACGCTATCCCTAACTTGTCTCTTAGAGGCTACGAAGTGGTCGATGCTGCCAAGGCAGCGTTAGAGAAGAAGTGTCCCGGTG
TTGTTTCTTGTGCTGATGTTCTTGCCTTAGTTGCTAGAGACGCTGTCTTAGTGATTAACGGACCATGGTGGCCGGTTCCACTGGGC
CGTAGGGATGGACGTATCTCAAGAAAATCTGAGGTTAATTTACCATCCCCATTCGCGGGAGTTGCTGCTTTGAAACAAAACTTCTT
GAACAAGGGACTTAACACTAAAGATTTTGTCGTTCTCTCAGGAGCTCACACCATTGGAATTTCTAATTGTGGTCTCATCAACAGCC
GTATCTACAACTTCACCGGGAAAGGCGATTTTGACCCTTCCATGAACCCTAGCTACGTTAGGGCATTGAAGAAAAGGTGCAAGCCA
ACTGATTTCAGGACGTCACTGGAGATGGACCCAGGGAGTGTCAAGAAGTTTGACTCTCACTACTTTAACATTGTTGCTCAGAAGAA
GGGTTTGTTCACATCTGACTCAACACTTCTTGATGACCCTGACACTAAAAGTTACATTGACACACAAGTTGCTACGGCTGGATCTT
CTTTCAACAAAGATTTCTCCGAGTCAATGGTTAAACTCGGGTTCGTTGAAATCCTCACCGGGAACAAAGGAGAGATCAGGAAGAGA
TGTGCCTTCGTCAACTGAGTTTCATCAAGTTAATATAAGAGCTCACTCTTTGGATGGTTGATTCAGCAATTTCCCAGTAACTCTTT
TTGTATGTTTTTTCGTTCCTTCAAGTCTGTTTTCAGACAAGAGTATTTCATTTTTCCTTTGTATGATGTTTTGGAATCTCATGTTT
AGTTGATTATTCATCACGTTTTATAAGTTACATAATCATTTCGCCAAAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892276 hypothetical protein ARALYDRAFT_887707 [Arabidopsis lyrata subsp. lyrata]13786e-150
NP_563732 peroxidase 1/2 [Arabidopsis thaliana]12721e-137
XP_002889541 predicted protein [Arabidopsis lyrata subsp. lyrata]12381e-133
XP_002892275 hypothetical protein ARALYDRAFT_470522 [Arabidopsis lyrata subsp. lyrata]11537e-124
XP_002309830 predicted protein [Populus trichocarpa]10211e-108

Swiss-Prot top hits (Blast detail)Scoree value
Q96506 Peroxidase 1/212725e-139
Q43735 Peroxidase 279373e-100
Q9LXG3 Peroxidase 568971e-095
O23044 Peroxidase 37922e-083
P37834 Peroxidase 17672e-080

TrEMBL top hits (Blast detail)Scoree value
Q67Z07 Putative peroxidase ATP12a12728e-138
B9HHE9 Predicted protein10211e-108
B9SMM0 Peroxidase 27, putative9861e-104
Q0WR91 Prx10 peroxidase-like protein8972e-094
B9H1I0 Predicted protein8506e-089

Arabidopsis top hits (Blast detail)Scoree value
AT1G05240.1 peroxidase, putative12733e-140
AT1G05250.1 peroxidase, putative12733e-140
AT3G01190.1 peroxidase 27 (PER27) (P27) (PRXR7)9382e-101
AT5G15180.1 peroxidase, putative8981e-096
AT1G05260.1 RCI3 (RARE COLD INDUCIBLE GENE 3); peroxidase7922e-084

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  40%
 
111  20%
 
122  40%

Unigene MembersMember information