Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN25408

FASTA Sequence
Unigene ID: UN25408Length: 2092 SSR 
ATCATAAGCAAACATCCATTATTTCTCTATTTTCTTGTTTTATCTCAAGAAACCCAACAAAGAGTGAACATAAGTTCCCAAAAGAA
ACAACATGAAAGACAACAACAACAACAAAAAAGAAGAACATAGACTTGAGAAGAAACAAAACCAATAGTATATGTTATGTGGATCG
AGAAGTAGAGAGAGAGACACTATAGTGGTGGTTCTTCCATGGTCAAAATCATCCAGAGAGATTGAAACTTTTTTTAAGCAGCAACG
TCTTTGTCCTTGGCGGCGGTATTGTCTCCTCCTCCTTCGAGCTGGCTCAAATTTCCTTTCTCCTTGATAAGCTGAATATGATGATG
CTTGCAATAAAGCTTCCCCTCGTGAGCTATGTAGTTCGAAGGACTTATCGTGCAGCCTCCGTGTGTACACTTGAAACAGCTCTTGT
GGTACAATGTTCCATTCACCGACACCTTCTCAATAGGATAGAGACAAATAGGAATAACCAAACCACGCCTACAAAATGCCAGTACC
ATGCAGCTGCTTCAAAGCCAACGTGATGCTCCTTCGTCAGATGACCAAGATATTGCCGAATACCACATATAATCAAAAAAAGAGTA
CCTATAATCACATGAAAACCATGAAAGCCTGTTGCTAAGAAAAAGGTAGAACCATAAATACTATCCGAAATAGTGAAGGGTGCTTG
ATAATATTCCATTCCTTGAAAGCCAGTAAATACTAGAGCCAGTAAAACGGTAGCTACTAAAGCATAAACTGCTCGTTTTTCCTTCC
CCGCGAGTATAGCATGATGAGCCCAAGTTACGGCAGCTCCGGATGAAAGGAGAATAAGGGTATTAAGAAAAGGGATTTCCCAAGGA
TCTAAAACCCCAATCCCTTTTGGGGGCCAAATACCTCCGATCTCTACCGCAGGTGCCAAAGAAGAATGAAAAAAAGCCCAAAAAAA
AGCAAAAAAGAACATAACCTCCGATACGATGAACAGAATAAAACCATATCGAAGTCCTAATTGTACGACTTTGGTATGATGTCCTT
CCAACGTGGATTCACGTAGAACATCGCGCCACCATACGAACATGGTATATAGGAGAAATATGAGGCCCAAACTTAGAAGTCTTGCA
CCCCCTTGAAATGAGTGCATGTACATCACACCTCCTACGGTGGTTGCCAAAGCTCCGAGTGAACCCGAAATAGGCCATGGACTTGG
ATCTACCAAATGATAAGAATGCCTCTGAGATTCAATCATAAACCACTTTGTCTCGGTTGTATGTAAACCCCCACCCTTCACCCCCC
AACGGGCTCTTTCTCTTTGGGGTCTAATTTTCTTTCTATCTGACAGGACAAACTAATAGGAAGGGATGGTTCTTTCATTGCATTGA
TAGAAGTCTAACTAGAAAAGGATCTCTCTATTACTTTGAGAAGAGAATCGTTGGTTTGACCGACGGAAAGCATGGGAGAAAGAAAG
ATGCACAAATAGACGAAAAGAAAGAAGAGAATGAGTCACAAGATAAAATGAAAATGAGTTCTCACTCTTATCATTTTCATAACACT
GATTGACGATGGCCCGAATCCGAATCTCACCTCAGATGTTCATCTGGCCCTCGTTCTCATTCTTTGTGTTATCACGGGCCCGCTTT
AAGAACTTCTTTTTATTTATAAAATCGGTAATCTCCCCATTGGGGTCGTTTTCCCTTCTGGTCTGGCCTTCTCATTGTTCCCAATT
CGGTTTATTAGCTCTTCCACACATTACCGGTGGCGAAGGCACTCCCCTTATGGGCGGAAATTGCAGCCCCTCTTTCGCTTGGTCAA
TTAGGGAGCCAATCAGTTCGGCTAACTCCATTTTGATCTTTCTTACTTCTTCATATTTTTTTTTAGATGAAATTATTCCTGTTGTT
CTGGGCAGGTCGAGACGCGGTCGCTTCGAAGAGCTGGCACCGCTTCCATCGCCTCCGACGGAATGAGAACAGCCATCCATAAAAGA
CATGAAAAAAGAATATAATGGTACAACAATGAAAGCGGCTGCCCAAGTCAGGCTCAACTCCATAAAGGGGCGCTTCATCAACAAGA
GAAGGATATTTAGAAAGGCTAGCATAAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
YP_717136 cytochrome c oxidase subunit 3 [Brassica napus]13771e-149
P92514 RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III13672e-148
CAA92273 cytochrome oxidase subunit 3 [Magnolia grandiflora]13654e-148
CAD32345 cytochrome oxidase subunit 3 [Gladiolus sp. CQ-2002]13611e-147
YP_003587238 cytochrome c oxidase subunit 3 [Citrullus lanatus]13611e-147

Swiss-Prot top hits (Blast detail)Scoree value
P92514 Cytochrome c oxidase subunit 313679e-150
P15953 Cytochrome c oxidase subunit 313401e-146
P14853 Cytochrome c oxidase subunit 312933e-141
P08745 Cytochrome c oxidase subunit 312844e-140
P14852 Cytochrome c oxidase subunit 312648e-138

TrEMBL top hits (Blast detail)Scoree value
Q6YSQ3 Cytochrome c oxidase subunit 313771e-149
Q96035 Cytochrome c oxidase subunit 313652e-148
D5I3A8 Cytochrome c oxidase subunit 313617e-148
Q5K579 Cytochrome c oxidase subunit 313617e-148
Q3LFE6 Cytochrome c oxidase subunit 313591e-147

Arabidopsis top hits (Blast detail)Scoree value
AT2G07687.1 cytochrome c oxidase subunit 313175e-145
ATMG00730.1 Encodes cytochrome c oxidase subunit 3.13175e-145
AT1G10200.1 WLIM1; transcription factor/ zinc ion binding3802e-036
AT2G39900.1 LIM domain-containing protein2323e-019
AT3G55770.1 LIM domain-containing protein2323e-019

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
123  27%
 
94  36%
 
101  9%
 
112  18%
 
181  9%

Unigene MembersMember information